EY728617

Overview
NameEY728617
Unique NameEY728617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1_PONAB (Phosphatidylinositide phosphatase SAC1 OS=Pongo abelii GN=SACM1L PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1
Query:  229 LLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESM-------FVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +L+ V     F+FS +Y++ ++LQ+   +N + + Q  S+       FVWN  L R +    + +++ + +++GF    + S+ G+ F + LI+RRS   AG RY  RG++ +G  AN VETEQIV       Y    +S VQ RGSIP+FWSQ
Sbjct:  121 MLNHVLNVDGFYFSTTYDLTHTLQR--LSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIV------HYNGSKASFVQTRGSIPVFWSQ 266          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1_HUMAN (Phosphatidylinositide phosphatase SAC1 OS=Homo sapiens GN=SACM1L PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1
Query:  229 LLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESM-------FVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +L+ V     F+FS +Y++ ++LQ+   +N + + Q  S+       FVWN  L R +    + +++ + +++GF    + S+ G+ F + LI+RRS   AG RY  RG++ +G  AN VETEQIV       Y    +S VQ RGSIP+FWSQ
Sbjct:  121 MLNHVLNVDGFYFSTTYDLTHTLQR--LSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIV------HYNGSKASFVQTRGSIPVFWSQ 266          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1_XENLA (Phosphatidylinositide phosphatase SAC1 OS=Xenopus laevis GN=sacm1l PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17
Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  229 LLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQS-----QYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +LS V     F+FS SY++ ++LQ+    +   Q      + +  FVWN  L R      +  ++ + +V+GF    + S+ G+ F + LI+RRS   AG RY  RG++ +G  AN VETEQIV       Y    +S VQ RGSIP +WSQ
Sbjct:  120 MLSHVLSVDGFYFSVSYDLTHTLQRLANTSPEFQEMSLLERADQRFVWNGNLLREFSAQPEIQKFAIPVVHGFIAIHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIV------HYNGNKASFVQTRGSIPFYWSQ 265          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1_BOVIN (Phosphatidylinositide phosphatase SAC1 OS=Bos taurus GN=SACM1L PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.127e-17
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  259 FFFSYSYNIMNSLQKNLCNNGTGQSQYESM-------FVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            F+FS +Y++ ++LQ+   +N + + Q  S+       FVWN  L R +    + +++ + +++GF    + S+ G+ F + LI+RRS   AG RY  RG++ +G  AN VETEQIV       Y    +S VQ RGSIPL+WSQ
Sbjct:  131 FYFSTTYDLTHTLQR--LSNTSPEFQEMSLLERADQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIV------HYNGSRASFVQTRGSIPLYWSQ 266          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1A_DANRE (Phosphatidylinositide phosphatase SAC1-A OS=Danio rerio GN=sacm1la PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 53/156 (33.97%), Postives = 84/156 (53.85%), Query Frame = 1
Query:  220 YKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNG------TGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +  +L+SV  T  F+F+  Y++ ++LQ+ L N        T   + +  FVWN  L R      + +++   +++GF    +  + G+ F + LI+RRS   AG RY  RG++ +G  AN VETEQI+       Y    +S +Q RGSIP +WSQ
Sbjct:  117 FLSMLNSVLNTDGFYFATDYDLTHTLQR-LSNTSPEFQEMTLLERADQRFVWNGHLLREFMAQPELHRFVFPVIHGFIAMRSCCINGKIFDWNLISRRSCFRAGVRYYVRGIDSEGHAANFVETEQII------QYNGAKASFIQTRGSIPFYWSQ 265          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC2_MOUSE (Phosphatidylinositide phosphatase SAC2 OS=Mus musculus GN=Inpp5f PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 1
Query:  223 KKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESM---FVWNHFLTRGIRN--TLKNNQWTVALVYGFFKQENLSVAGRD-------------------------FKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            ++LL     ++ F++S +Y++ NS+Q+       G+  ++ +   F WN ++ + +    T   + W + ++ GF + E L V   +                         F   LI+RRSRH AG RY +RGV++ G VAN VETEQ++             S +Q RGS+P+FWSQ
Sbjct:  164 EELLKMFMDSESFYYSLTYDLTNSVQRQSTGERDGRPLWQKVDDRFFWNKYMIQALTEIGTPDVDFWIIPIIQGFVQIEELVVNYNESSDDDKSSPETPPQDSTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNGNVANYVETEQLI------HVHHHTLSFIQTRGSVPVFWSQ 336          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC2_HUMAN (Phosphatidylinositide phosphatase SAC2 OS=Homo sapiens GN=INPP5F PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 1
Query:  223 KKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESM---FVWNHFLTRGIRN--TLKNNQWTVALVYGFFKQENLSVAGRD-------------------------FKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            ++LL     ++ F++S +Y++ NS+Q+       G+  ++ +   F WN ++ + +    T   + W + ++ GF + E L V   +                         F   LI+RRSRH AG RY +RGV++ G VAN VETEQ++             S VQ RGS+P+FWSQ
Sbjct:  164 EELLKMFMDSESFYYSLTYDLTNSVQRQSTGERDGRPLWQKVDDRFFWNKYMIQDLTEIGTPDVDFWIIPMIQGFVQIEELVVNYTESSDDEKSSPETPPQESTCVDDIHPRFLVALISRRSRHRAGMRYKRRGVDKNGNVANYVETEQLI------HVHNHTLSFVQTRGSVPVFWSQ 336          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SAC1B_DANRE (Phosphatidylinositide phosphatase SAC1-B OS=Danio rerio GN=sacm1lb PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 1
Query:  229 LLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQY------ESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQETSWMNIKA*IILSKKDQNMRAQDSF*KSCKRIWNPMIVL 789
            ++++V  T  F+F   Y++ ++ Q+ L N      +       +  F+WN  L R I    + +++   +++GF   +   + G+ F++ +I+RRS   AG RY  RG++ +G  AN VETEQIV       +    +S VQ RGSIP FWSQ  + +  K   ++SK   +M       +S   I+   ++L
Sbjct:  120 MINNVLNTDGFYFCTDYDLTHT-QQRLSNTSPDFQEMSLLERADQRFMWNGNLLREIIAQPELHKFAFPVIHGFIVMKPCCINGKVFEWIIISRRSCFRAGVRYYVRGIDSEGHAANFVETEQIV------QFNNARASFVQTRGSIPFFWSQRPN-LKYKPKPLISKDTNHMDGLRRHFESQVLIYGKQVIL 304          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYJ1_SCHPO (Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Schizosaccharomyces pombe GN=syj1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  259 FFFSYSYNIMNSLQKNLCNNGTGQSQYESM---FVWNHFLTRGI-----------RNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQE 672
            F+FS  ++I   LQ       T + QY+SM   F+WN F+ R +           ++ L   ++    + GF   E   +  +  + +LI+R S   AGTR+L RGV++ G VAN VETE I+             S  QVRGSIP+FW QE
Sbjct:  153 FYFSLDFDITTRLQLRTSQTMT-EPQYDSMHTQFMWNEFMLRQLIKFRSHLNGDEKSALDGCRFFTCAIRGFASTEQFKLGIQTIRLSLISRLSSLRAGTRFLSRGVDDDGNVANFVETETILDSS------KYCVSYCQVRGSIPIFWEQE 297          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ1_HUMAN (Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  256 DFFFSYSYNIMNSLQKNLCNNGTGQSQY-ESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +F+F++S + + SL  +L  + + Q Q  ++ F WN  L   +++   N + W + L+ G  +   +  A +  K  LI+R S   AGTR+  RG N+ G VAN VETEQ+V  D        +SS +Q+RGS+PLFW Q
Sbjct:  127 NFYFAWSASGI-SLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD------DSVSSFIQIRGSVPLFWEQ 259          
The following BLAST results are available for this feature:
BLAST of EY728617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SAC1_PONAB3.160e-1736.36Phosphatidylinositide phosphatase SAC1 OS=Pongo ab... [more]
SAC1_HUMAN3.160e-1736.36Phosphatidylinositide phosphatase SAC1 OS=Homo sap... [more]
SAC1_XENLA4.127e-1736.84Phosphatidylinositide phosphatase SAC1 OS=Xenopus ... [more]
SAC1_BOVIN4.127e-1737.50Phosphatidylinositide phosphatase SAC1 OS=Bos taur... [more]
SAC1A_DANRE1.568e-1633.97Phosphatidylinositide phosphatase SAC1-A OS=Danio ... [more]
SAC2_MOUSE6.588e-1529.61Phosphatidylinositide phosphatase SAC2 OS=Mus musc... [more]
SAC2_HUMAN8.605e-1530.17Phosphatidylinositide phosphatase SAC2 OS=Homo sap... [more]
SAC1B_DANRE1.124e-1429.53Phosphatidylinositide phosphatase SAC1-B OS=Danio ... [more]
SYJ1_SCHPO2.504e-1434.87Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Sc... [more]
SYNJ1_HUMAN4.722e-1336.43Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728617 ID=EY728617; Name=EY728617; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGCAACATTGCCGTAGGTGATGTTATTATTAATTGTTGATT
GAGGCAAGGTATCATTGGGGTTTGTAGGGACAACAGTTTCTTTCCTTTTT
GTTTTAAATTTATAGCTTTTTTTTTTTCCTTAAATTCTTTCCACTTTGAT
CAATGTATTATACATGTTTTAACGTGCTTTGCTTTTCTTTCCATCCATTT
TTCTCTTGTGATGTGTAGATACAAGAAGCTCCTCAGCTCTGTGGATCTTA
CGAAGGACTTCTTTTTCAGCTACTCATACAATATCATGAATAGTCTTCAA
AAGAACTTATGTAATAATGGGACAGGACAATCACAGTATGAATCAATGTT
TGTCTGGAATCATTTCTTGACTCGTGGAATTCGGAATACTCTCAAGAATA
ATCAGTGGACTGTTGCATTAGTATATGGATTCTTTAAGCAGGAGAACCTT
TCTGTAGCTGGGAGGGACTTCAAGTTCACTCTCATTGCAAGACGCTCACG
GCATTATGCTGGCACAAGATATTTGAAACGCGGTGTCAATGAGAAGGGTA
GAGTAGCCAATGATGTTGAGACGGAACAGATTGTGGTTGAAGATGTTCCT
GAANGATACCCAATGCAAATCAGTTCTGTTGTACAAGTCCGTGGATCGAT
CCCACTTTTCTGGTCTCAGGAGACGTCATGGATGAATATTAAAGCCTGAA
TTATATTATCAAAGAAAGATCAAAATATGAGGGCCCAAGATTCATTTTGA
AAATCTTGCAAAAGGATATGGAATCCTATGATAGTCTTGATTTGATTAGA
CCATGAGAAAAGCTGAAAGAAACATCTTCGGGCACAGTTGAAATGCTATT
CGTTCTTGATAACAATTGTCGAACGAAACCGCCTAAATCCTTAGGTTGAC
TCCC
back to top