EY728617

Overview
NameEY728617
Unique NameEY728617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ2_MOUSE (Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  319 GTGQSQYESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            G   S++ + F WN  L   +R    N + W + ++ G      +  + +  K  LI+R S   AG R+L RGVN+ G V+N VETEQ +  D        +SS VQ+RGS+PLFW Q
Sbjct:  150 GDDGSEWGTSFFWNQLLHVPLRQHQVNCHNWLLKVICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQTIYMD------DGVSSFVQIRGSVPLFWEQ 261          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ2_RAT (Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  319 GTGQSQYESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            G   S++ + F WN  L   +R    N + W + ++ G      +  + +  K  LI+R S   AG R+L RGVN+ G V+N VETEQ +  D        +SS VQ+RGS+PLFW Q
Sbjct:  150 GDDCSEWGTSFFWNQLLHVPLRQHQVNCHDWLLKVICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQAIYMD------DGVSSFVQIRGSVPLFWEQ 261          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: YF51_SCHPO (Uncharacterized protein C3C7.01c OS=Schizosaccharomyces pombe GN=SPAC3C7.01c PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 66/240 (27.50%), Postives = 100/240 (41.67%), Query Frame = 1
Query:  220 YKKLLSSVDLTKDFFFSYSYNIMNSLQKN--LCNNGTGQSQYESMFVWN----HFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQ-ISSVVQVRGSIPLFWSQ------------------ETSW------------MNIKA*IILSKKDQNMRAQDSF*KSCKRIWNPMIVLI*LDHEKS*KKHL 828
            Y  LL+         FS + ++  SLQ+   L  +    S+Y   F WN    H L       L   +W   ++ G     N  +   + +  +I R S  YAGTRY  RGVN +G  AN  E EQI++ + P     Q + S  Q+RGSIP+FW++                  ET +             N+    +L +K +    +  F K CKR  NP +  +  D+ K   ++L
Sbjct:  112 YISLLNKHLSKGQILFSPTLDLTCSLQRLRVLTQSFELTSKYNYRFFWNKYAFHELIELTNKDLGFQEWIQPMIQGNIAITNSFLKTYNLRLCVITRHSPDYAGTRYFTRGVNAQGSAANFNEIEQIIMIESPITLEEQMVLSFTQIRGSIPMFWAEVNDLHYRPLLSLQPLDYSETVFGKHFQELANDYGDNLVVVNLLDQKGREAPLRSGFEKLCKRNKNPPLSYVYYDYHKQGSRNL 351          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ2_HUMAN (Synaptojanin-2 OS=Homo sapiens GN=SYNJ2 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 50/151 (33.11%), Postives = 76/151 (50.33%), Query Frame = 1
Query:  223 KKLLSSVDLTKDFFFSYSYNIMN-SLQKNLCNNGTGQSQYESMFVWNHFLTRGIR-NTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            KK+LSS      F+FS+  +     L       G   S++ + F WN  L   +R + +    W + ++ G      +  + +  K  L++R S    GTR+  RGVN+ G V+N VETEQ++  D        +SS VQ+RGS+PLFW Q
Sbjct:  121 KKILSS----GVFYFSWPNDGSRFDLTVRTQKQGDDSSEWGNSFFWNQLLHVPLRQHQVSCCDWLLKIICGVVTIRTVYASHKQAKACLVSRVSCERTGTRFHTRGVNDDGHVSNFVETEQMIYMD------DGVSSFVQIRGSVPLFWEQ 261          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ1_BOVIN (Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  274 SYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            S N   SLQ++  +N          F WN  L   +++   N   W + L+ G  +   +  A +  K  LI+R S   AGTR+  RG N+ G VAN VETEQ+V  D        +SS +Q+RGS+PLFW Q
Sbjct:  142 SLNAHRSLQEHTTDN---------RFSWNQSLHLHLKHYGVNCADWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD------DSVSSFIQIRGSVPLFWEQ 259          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ1_RAT (Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  256 DFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +F+F++S + ++       +    +   ++ F WN  L   +++   N + W + L+ G  +   +  A +  K  LI+R S   AGTR+  RG N+ G VAN VETEQ++  D        +SS +Q+RGS+PLFW Q
Sbjct:  127 NFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD------DCVSSFIQIRGSVPLFWEQ 259          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: SYNJ1_MOUSE (Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  256 DFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKN-NQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQ 669
            +F+F++S + ++       +    +   ++ F WN  L   +++   N + W + L+ G  +   +  A +  K  LI+R S   AGTR+  RG N+ G VAN VETEQ++  D        +SS +Q+RGS+PLFW Q
Sbjct:  127 NFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD------DCVSSFIQIRGSVPLFWEQ 259          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: INP53_YEAST (Inositol-1,4,5-trisphosphate 5-phosphatase 3 OS=Saccharomyces cerevisiae GN=INP53 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  223 KKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQ-----YESMFVWNHFLTR-----------GIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQETSWMN 687
            KKLLS+      F++S  +++ ++LQ    + G GQ       YE  ++WN FL +            ++  L +  +   ++ GF +     V       T+I+++S   AGTR+  RGV+++  VAN VETE I+             +  Q+RGSIP+FW Q TS +N
Sbjct:  143 KKLLSN----GSFYYSSDFDLTSTLQ----HRGYGQHSLSTDTYEEEYMWNSFLMQEMITYRDHLDTNLKQILDDEGFLTTVIRGFAETFVSYVKKLKVALTIISKQSWKRAGTRFNARGVDDEANVANFVETEFIMYSS------QYCYAFTQIRGSIPVFWEQGTSLIN 299          
BLAST of EY728617 vs. ExPASy Swiss-Prot
Match: INP52_YEAST (Inositol-1,4,5-trisphosphate 5-phosphatase 2 OS=Saccharomyces cerevisiae GN=INP52 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 48/169 (28.40%), Postives = 81/169 (47.93%), Query Frame = 1
Query:  223 KKLLSSVDLTKDFFFSYSYNIMNSLQKN-LCNNGTGQSQYESMFVWNHFLTRGI-----------RNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEXYPMQISSVVQVRGSIPLFWSQETSWMNIK 693
            +KLLS+      F++S  +++  +LQK     +      ++  F+WN FL   I           +  L    +   ++ GF +     +       T+I+R+S   AGTR+  RG+++ G VAN VETE I+             +  Q+RGS+P+FW Q+TS ++ K
Sbjct:  168 RKLLSN----GSFYYSTDFDLTCTLQKRGFTEHSLSFDDFDREFMWNSFLMDEIITYRDRLDVTAKELLDQRGFLTTVIRGFAETIFSYINRLKVGLTIISRQSWKRAGTRFNARGIDDDGHVANFVETEMIMYSS------QYCYAFTQIRGSLPIFWEQDTSLISPK 326          
The following BLAST results are available for this feature:
BLAST of EY728617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SYNJ2_MOUSE8.054e-1337.29Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2[more]
SYNJ2_RAT1.052e-1237.29Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 ... [more]
YF51_SCHPO2.343e-1227.50Uncharacterized protein C3C7.01c OS=Schizosaccharo... [more]
SYNJ2_HUMAN3.060e-1233.11Synaptojanin-2 OS=Homo sapiens GN=SYNJ2 PE=1 SV=3[more]
SYNJ1_BOVIN3.060e-1236.84Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 P... [more]
SYNJ1_RAT3.997e-1232.37Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 ... [more]
SYNJ1_MOUSE3.997e-1232.37Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3[more]
INP53_YEAST1.519e-1130.41Inositol-1,4,5-trisphosphate 5-phosphatase 3 OS=Sa... [more]
INP52_YEAST5.772e-1128.40Inositol-1,4,5-trisphosphate 5-phosphatase 2 OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728617 ID=EY728617; Name=EY728617; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGCAACATTGCCGTAGGTGATGTTATTATTAATTGTTGATT
GAGGCAAGGTATCATTGGGGTTTGTAGGGACAACAGTTTCTTTCCTTTTT
GTTTTAAATTTATAGCTTTTTTTTTTTCCTTAAATTCTTTCCACTTTGAT
CAATGTATTATACATGTTTTAACGTGCTTTGCTTTTCTTTCCATCCATTT
TTCTCTTGTGATGTGTAGATACAAGAAGCTCCTCAGCTCTGTGGATCTTA
CGAAGGACTTCTTTTTCAGCTACTCATACAATATCATGAATAGTCTTCAA
AAGAACTTATGTAATAATGGGACAGGACAATCACAGTATGAATCAATGTT
TGTCTGGAATCATTTCTTGACTCGTGGAATTCGGAATACTCTCAAGAATA
ATCAGTGGACTGTTGCATTAGTATATGGATTCTTTAAGCAGGAGAACCTT
TCTGTAGCTGGGAGGGACTTCAAGTTCACTCTCATTGCAAGACGCTCACG
GCATTATGCTGGCACAAGATATTTGAAACGCGGTGTCAATGAGAAGGGTA
GAGTAGCCAATGATGTTGAGACGGAACAGATTGTGGTTGAAGATGTTCCT
GAANGATACCCAATGCAAATCAGTTCTGTTGTACAAGTCCGTGGATCGAT
CCCACTTTTCTGGTCTCAGGAGACGTCATGGATGAATATTAAAGCCTGAA
TTATATTATCAAAGAAAGATCAAAATATGAGGGCCCAAGATTCATTTTGA
AAATCTTGCAAAAGGATATGGAATCCTATGATAGTCTTGATTTGATTAGA
CCATGAGAAAAGCTGAAAGAAACATCTTCGGGCACAGTTGAAATGCTATT
CGTTCTTGATAACAATTGTCGAACGAAACCGCCTAAATCCTTAGGTTGAC
TCCC
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