EY728594

Overview
NameEY728594
Unique NameEY728594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728594 vs. ExPASy Swiss-Prot
Match: ALDH3_DICDI (Aldehyde dehydrogenase family 3 comG OS=Dictyostelium discoideum GN=comG PE=3 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 3.327e-11
Identity = 27/82 (32.93%), Postives = 39/82 (47.56%), Query Frame = 3 
Query:  144 SLFVKELRGTFASGKTKSYGWRVSHLKSLMKMLNEREPDIVDALRQDLDKPELESSVYEVAXXXXXXXXXXXXXXHWMTPEK 389
            S+  K LR  F S KT+   WR S LK++ KM++E + +I  A+++DL K E E    E+                W   EK
Sbjct:   12 SVISKNLRKVFLSQKTRKIDWRYSQLKAIKKMMSENKDNITAAVKKDLGKHEFEIHQTEIVMIQTELDETISHLESWNKTEK 93

HSP 2 Score: 38.5058 bits (88), Expect = 3.327e-11
Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 1 
Query:  430 LVPHPLGVVLLISAWHNPFLSSLDPLVGAIAAG 528
            ++  PLGVVL++S W+ P   +L PL+GAIA G
Sbjct:  107 ILKEPLGVVLIMSPWNYPVNLALIPLIGAIAGG 139
The following BLAST results are available for this feature:
BLAST of EY728594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ALDH3_DICDI3.327e-1132.93Aldehyde dehydrogenase family 3 comG OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728594 ID=EY728594; Name=EY728594; organism=Citrus sinensis; type=EST; length=813bp
CACGCGTCCGTGTTTGTAACCGAAGCCAAAAAANAAAAAACAGAATTCCG
AAATCCATCTGTCCTTCTCTCGCTTTGTCAATTGCAATGGGGAGTGAGGA
GGAGACGAACAAAAACAATGAGGTGTTCGATGCGGAGGCGGCGAGCTTGT
TCGTGAAGGAGCTGAGAGGAACTTTTGCGTCTGGAAAAACGAAGAGCTAC
GGATGGAGAGTGTCTCACTTGAAGAGTTTGATGAAGATGCTTAACGAGCG
CGAGCCGGACATCGTCGACGCTCTTCGTCAAGATCTCGATAAGCCGGAAC
TTGAATCCTCCGTTTACGAGGTAGCATTGTTGAAGACTTCTCTCACGTCC
TCACTCACGGAACTAACACACTGGATGACACCAGAGAAGGCGACAACTTC
CCTCACAACTGCGGCCTCCATCACCTGAACTAGTGCCCCACCCACTGGGT
GTCGTATTACTCATCTCCGCATGGCATAATCCTTTCTTGTCGTCTCTCGA
TCCACTCGTCGGGGCTATTGCAGCTGGTATGGCCTGGTTCTACCGCCACC
TGACTTGGCGCTCCCTCGTCATCGTTGTTTGCCGGCTCGGTTGGTGACCT
CACGCCTCCGTCCCCCCTTCGACGGGCGCGCGGCTACGCCCCGAGCGCCC
CAGCTCGCCGGCTGCGCGGTAGCTCCGGGCTCATTCCTCGCGTGGGTCTC
TCGAGCCGTCCGGCCGTCCCCGTCGTGCCTCCTCCCGCGCTCCGGGCCGC
GCTCCTATCCTCGTCTGGTCCGGGTTTGCTCAGGCGTGCGGATCGGCCCT
CGCTCCGCTGTCT
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