EY728231

Overview
NameEY728231
Unique NameEY728231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5972 contig Csv1_Contig5972:139..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: ITK_MOUSE (Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN=Itk PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.935e-12
Identity = 46/146 (31.51%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  295 KLGEGGFGTVYKGV-IGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIV 729
            ++G G FG V+ G  + + ++A+K +   +  E ++   EA V+ ++ H  LV+L G C+E+    L++E+M +  L  +L   ++R +    T + +   V +G+ YL    +  +IHRDL A N L+ ++   K+SDFGM R V
Sbjct:  373 EIGSGQFGLVHLGYWLNKDKVAIKTIQEGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RSQRGLFAAETLLGMCLDVCEGMAYL---EKACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 512          

HSP 2 Score: 20.4014 bits (41), Expect = 1.935e-12
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  824 FFDKSDVFSFGV 859
            +  KSDV+SFGV
Sbjct:  540 YSSKSDVWSFGV 551          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: Y0019_DICDI (Probable serine/threonine-protein kinase DDB_G0278521 OS=Dictyostelium discoideum GN=DDB_G0278521 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 60/201 (29.85%), Postives = 92/201 (45.77%), Query Frame = 1
Query:  277 NFSAANKLGEGGFGTVYKGVIGQGEIAVKRLL-------GKSGQEIKE--LKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLF--------------DPTKREILDWRTRVQIIK-GVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPE 807
            NF  A K+G G FG VY        +AVKR+        GKS Q I++  +     ++      + VKL   CIE+ E LL+ E+  N SL   L               +    +I+     +  +   +A G+ YLH   + +IIHRDL + NIL+D++   KI+DFG++R        +++   T    G   + SPE
Sbjct:  529 NFKTARKIGAGAFGDVYLVEWRNKNVAVKRVKIEKILESGKSYQWIRDKFILEAVLMVKLSNFSSFVKLYATCIEEKELLLVLEFCDNGSLYTILNTIPIGGAGANNNNNNNNNNDIIQSLPSINTLSLNIANGMNYLHSL-KPQIIHRDLTSQNILIDRNGIAKIADFGISRF------KNDIGDKTMTSIGNPRFRSPE 722          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: TAOK2_XENLA (Serine/threonine-protein kinase TAO2 OS=Xenopus laevis GN=taok2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVY--KGVIGQGEIAVKRLL--GK-SGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYAL 816
            F+   ++G G FG VY  + +     +A+K++   GK S ++ +++  E   + +++H N ++  GC + +    L+ EY    + D  L +  K+ + +      I  G  QGL YLH ++   +IHRD+KA NILL +    K+ DFG A I+   N             GT  +M+PE  L
Sbjct:   28 FADLREIGHGSFGAVYFARDIRNNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQKLRHPNTIEYKGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEMEIAA-ITHGALQGLAYLHNHN---MIHRDVKAGNILLTEPGLVKLGDFGSASIMAPANS----------FVGTPYWMAPEVIL 195          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_OTOGA (Serine/threonine-protein kinase 4 OS=Otolemur garnettii GN=STK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_MOUSE (Serine/threonine-protein kinase 4 OS=Mus musculus GN=Stk4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_MACMU (Serine/threonine-protein kinase 4 OS=Macaca mulatta GN=STK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_LEMCA (Serine/threonine-protein kinase 4 OS=Lemur catta GN=STK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_HUMAN (Serine/threonine-protein kinase 4 OS=Homo sapiens GN=STK4 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_CERAE (Serine/threonine-protein kinase 4 OS=Cercopithecus aethiops GN=STK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: STK4_BOVIN (Serine/threonine-protein kinase 4 OS=Bos taurus GN=STK4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 1
Query:  280 FSAANKLGEGGFGTVYKGVIGQ-GEI-AVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALE 819
            F    KLGEG +G+VYK +  + G+I A+K++  +S  +++E+  E S++ Q    ++VK  G   +  +  ++ EY    S+   +    + + L       I++   +GL YLH    +R IHRD+KA NILL+ + + K++DFG+A     G   D +    + I GT  +M+PE   E
Sbjct:   30 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVI-GTPFWMAPEVIQE 198          
The following BLAST results are available for this feature:
BLAST of EY728231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ITK_MOUSE1.935e-1231.51Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN... [more]
Y0019_DICDI2.343e-1229.85Probable serine/threonine-protein kinase DDB_G0278... [more]
TAOK2_XENLA2.343e-1229.35Serine/threonine-protein kinase TAO2 OS=Xenopus la... [more]
STK4_OTOGA2.343e-1231.32Serine/threonine-protein kinase 4 OS=Otolemur garn... [more]
STK4_MOUSE2.343e-1231.32Serine/threonine-protein kinase 4 OS=Mus musculus ... [more]
STK4_MACMU2.343e-1231.32Serine/threonine-protein kinase 4 OS=Macaca mulatt... [more]
STK4_LEMCA2.343e-1231.32Serine/threonine-protein kinase 4 OS=Lemur catta G... [more]
STK4_HUMAN2.343e-1231.32Serine/threonine-protein kinase 4 OS=Homo sapiens ... [more]
STK4_CERAE2.343e-1231.32Serine/threonine-protein kinase 4 OS=Cercopithecus... [more]
STK4_BOVIN2.343e-1231.32Serine/threonine-protein kinase 4 OS=Bos taurus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-B09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728231 ID=EY728231; Name=EY728231; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGATCGTTCACCGTAACCACAAATCGAACTATTTTTCTCGC
CCTATCGGCTACTCTAGCTGGAATGGCCGCCTTGGGCTTGACAATTTTTT
GTTTCAGGAGAAATACCACAAACAAAGGGGAGGATTTGATGAAATTTGAT
CTGGGTATGAACCTAAAGGTCGATGTAGAGCTTACAGAAGGCAATAATAA
GTGCAAAAAAGGGTGCGAAAAGGAAGTTGATCAATTTCCCTTGTTCAGTT
TTTCCAGTGTTTCTTCTGCAACTGGTAATTTCTCCGCAGCAAATAAGCTT
GGCGAAGGAGGCTTCGGAACTGTTTACAAGGGAGTAATAGGGCAAGGTGA
GATAGCTGTGAAAAGGCTTTTAGGAAAATCCGGACAGGAGATAAAAGAGT
TAAAAAACGAAGCATCGGTAATAGCCCAGGTTCAACACAAGAATCTTGTT
AAACTTTTGGGTTGCTGCATTGAGAAAGATGAGAGGTTATTGATCTATGA
GTACATGCCAAATAAAAGCTTGGATTGCTTCCTCTTTGATCCAACCAAAC
GAGAAATATTAGATTGGAGAACCCGTGTTCAGATCATTAAAGGAGTAGCT
CAAGGGCTTCTTTATCTTCATCAATATTCCAGAGTCCGAATCATTCACAG
GGATTTGAAAGCTAGCAATATCTTGTTGGATAAAGATATGAATCCTAAAA
TTTCAGATTTTGGAATGGCAAGAATAGTTTTTGGAGGGAATGATGANGAT
GAGTTACNANNGCACACTAGTANGATCTCCGGGACTTATGGATACATGTC
TCCTGAATATGCACTTGAAGGAATTTTTCGATAAATCGGATGTCTTTAGC
TTCGGAGTTTGTTGCTTGAGACGTGAGTGGCAGAAGACACTGGATTTATC
GAACA
back to top