EY728218

Overview
NameEY728218
Unique NameEY728218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:42..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.811e-14
Identity = 51/143 (35.66%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   18 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 443
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   75 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 443
            AG I +EL++  TP+   NF  LC             +Y G+ FHR++P F+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 60/172 (34.88%), Postives = 75/172 (43.60%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT------AKTE-----W----------------LDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 512
            G + + LF D  P+T  NF        G+ K G   +Y G  FHR+IP FM Q            +SIYG  F DE   + +   G LSMANAGP TNGSQFF+        AK E     W                LD +H VFGQ+V+           G  +G  +KP
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKP 457          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   18 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 443
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   18 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 443
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.348e-13
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   18 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 443
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:    7 QEPPTNGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 52/167 (31.14%), Postives = 75/167 (44.91%), Query Frame = 3
Query:   18 QSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 515
            Q    N KV    T     AG I +EL++   P+   NF  LC             +Y  + FHRV+P F+ Q            ES++G  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V  G  +   +       G   +PV
Sbjct:    7 QEPPSNGKVLLKTT-----AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTIYNILRLAEVDIGEDERPV 156          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTAKT-EWLDGKHVVFGQVVEGMDVVKAIEK 479
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T +  ++LDG H VFG+V EGMD+VK I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINE 141          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTAKT-EWLDGKHVVFGQVVEGMDVVKAIEK 479
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T +  ++LDG H VFG+V EGMD++K I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKINE 141          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 3
Query:   75 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 449
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
The following BLAST results are available for this feature:
BLAST of EY728218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
SDC10_BOVIN8.811e-1435.66Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_DANRE1.503e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
BPPI_STRP62.564e-1334.88Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
SDC10_PONAB3.348e-1334.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA3.348e-1334.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN3.348e-1334.97Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
SDC10_XENLA7.459e-1331.14Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL4_MOUSE8.247e-1233.57Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN1.077e-1132.87Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL2_ASPOR1.407e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728218 ID=EY728218; Name=EY728218; organism=Citrus sinensis; type=EST; length=559bp
CCACGCGTCCGATCAACCAATCAAAAATGCCAAACCCCAAAGTGTTCTTC
GACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTT
CGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCG
GCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCG
TCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCAC
CGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCG
ATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCG
AATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAA
GACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAG
GGATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGG
ACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTG
ATCATGATA
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