FK826725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.840e-41 Identity = 81/101 (80.20%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQVST+VVE YNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNR RFDGA+NVD+TEF+TNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFRTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41 Identity = 85/102 (83.33%), Postives = 87/102 (85.29%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRS-LDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFTIYPSPQVSTAVVE YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRS LDIERPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 74 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLLDIERPTYTNLNRLVSQIISSLTTSLRFDGALNVDVTEFQTNL 175
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41 Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQV+TAVVE YNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.934e-41 Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQV+TAVVE YNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.167e-40 Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQVST+VVE YNSVLSTHSLLEHTDV++LLDNEAIYDICRRSL+IERPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.167e-40 Identity = 80/101 (79.21%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQVST+VVE YNSVLSTHSLLEHTDV++LLDNEAIYDICRRSLDIERPTYTNLNR RFDGA+NVD+ EFQTNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.524e-40 Identity = 81/101 (80.20%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKL FTIYPSPQVSTAVVE YNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 159 VDYGKKSKLTFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.524e-40 Identity = 80/101 (79.21%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKLGFT+YPSPQVST+VVE YNSVLSTHSLLEHTDV++LLDNEAIYDICRRSL IERPTYTNLNR RFDGA+NVD+TEFQTNL Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.990e-40 Identity = 81/101 (80.20%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYGKKSKL FT+YPSPQVSTAVVE YNSVLSTHSLLEHTDVAV+LDNEA+YDICRR+LDIERPTYTNLNR RFDGA+NVDITEFQTNL Sbjct: 159 VDYGKKSKLCFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNL 259
BLAST of FK826725 vs. ExPASy Swiss-Prot
Match: TBA_WHEAT (Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.599e-40 Identity = 79/101 (78.22%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 43 VDYGKKSKLGFTIYPSPQVSTAVVETYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNL 345 VDYG+KSKLGFT+YPSPQVST+VVE YNSVLSTHSLLEHTDV++LLDNEAIYDICRRSLDIERPTYTNLNR RFDGA+NVD+ EFQTNL Sbjct: 159 VDYGRKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNL 259 The following BLAST results are available for this feature:
BLAST of FK826725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FK826725 ID=FK826725; Name=FK826725; organism=Citrus sinensis; type=EST; length=346bpback to top |