FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:412..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.334e-31
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT RLEK  SYDEIK A+K  SE +LKGILGYTEDD+VS+D  GD+ SSIFDAKAGIAL+  FVKLVSWYDNEWGYS
Sbjct:  235 PTSNVSVVDLTCRLEKATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGIALNSNFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.742e-31
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT RLEK ASYDEIKA +K  SE +LKGILGYTED VVS DF+G++ SSIFDA AGI+L+  FVKLVSWYDNEWGYS
Sbjct:  236 PTTNVSVVDLTARLEKGASYDEIKAEVKRASENELKGILGYTEDAVVSQDFIGNSHSSIFDAAAGISLNNNFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.742e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVR+EK A+YDEIK AIK  +EG LKG+L YTEDD VSTD +G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS
Sbjct:  235 PTANVSVVDLTVRIEKGATYDEIKQAIKEAAEGPLKGVLAYTEDDFVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.275e-31
Identity = 67/86 (77.91%), Postives = 72/86 (83.72%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDL VRLEK ASYDEIK AIK  SE   KGILGYTE+ VVSTDF G++ SSIFD  AGIAL+K FVKL+SWYDNEWGYS
Sbjct:  235 PTVDVSVVDLVVRLEKPASYDEIKQAIKEASETTHKGILGYTEEKVVSTDFTGNDNSSIFDRDAGIALNKTFVKLISWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.275e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT+DVSVVDL VRLEK+A+YDEIKAA+K    G LKGIL YTED +VSTDF G+  SSIFDA AGIAL+K FVKL++WYDNEWGYS
Sbjct:  235 PTLDVSVVDLVVRLEKEATYDEIKAAVKEAVAGPLKGILDYTEDALVSTDFTGNTHSSIFDASAGIALNKNFVKLIAWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.275e-31
Identity = 66/86 (76.74%), Postives = 75/86 (87.21%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV+L K+A+YDEIKA IK  SE +LKGILGYTED VVS+DF+GD  SSIFDA AGI LS +FVKLV+WYDNE+GYS
Sbjct:  233 PTVDVSVVDLTVKLAKEATYDEIKAVIKKASENELKGILGYTEDAVVSSDFLGDTNSSIFDAAAGIQLSPKFVKLVTWYDNEYGYS 318          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.972e-31
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDLTV LEK ASYDEI A +KA+S+G LKG+LGYTED VV+TDF GD R+SIFDA+AGIAL   F+K+VSWYDNEWGYS
Sbjct:  235 PTSDVSVVDLTVELEKAASYDEICAEMKAQSQGALKGVLGYTEDKVVATDFRGDARTSIFDAEAGIALDGTFIKVVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.881e-31
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV L K+ SYDEIKAA+K  SEG +KGILGYTEDDVVS+DF+GD  SSI DA AGI L+  FVKLVSWYDNE+GYS
Sbjct:  234 PTVDVSVVDLTVNLAKETSYDEIKAALKKASEGSMKGILGYTEDDVVSSDFLGDAHSSIVDAAAGIQLTPTFVKLVSWYDNEFGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.069e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT R EK  +YD+IKAA+KA SEG+LKGILGY+ED +VSTD  GD RSSIFDA AGIAL+  FVKL+SWYDNEWGYS
Sbjct:  236 PTANVSVVDLTCRTEKPVTYDQIKAAVKAASEGELKGILGYSEDALVSTDLNGDPRSSIFDASAGIALNDRFVKLISWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.069e-31
Identity = 62/86 (72.09%), Postives = 76/86 (88.37%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTVDVSVVDLTV+L K+A+YDEIKAA+K  S+GKLK ++GYTED VVS+DF+GD  S+IFDA AGI LS +FVK+V+WYDNE+GYS
Sbjct:  233 PTVDVSVVDLTVKLAKEATYDEIKAAVKKASQGKLKNVVGYTEDSVVSSDFLGDTHSTIFDASAGIQLSPKFVKVVAWYDNEYGYS 318          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3P_ASPNG1.334e-3176.74Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_USTMA1.742e-3175.58Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_COLLN1.742e-3174.42Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_PHACH2.275e-3177.91Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_OMPOL2.275e-3174.42Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P2_KLULA2.275e-3176.74Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_RALSO2.972e-3175.58Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P_ZYGRO3.881e-3176.74Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_PARBA5.069e-3174.42Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P1_KLULA5.069e-3172.09Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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