FK826684

Overview
NameFK826684
Unique NameFK826684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length258
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:412..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 5.604e-30
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PTV+VS+VD TVR  KD +YDE+KAAIK  SEG LKGIL YTEDD+VSTD + D  SS FDAKAGIAL+K FVK++SWYDNE+GYS
Sbjct:  234 PTVNVSLVDFTVRFAKDVTYDEVKAAIKEASEGPLKGILAYTEDDIVSTDILTDPHSSTFDAKAGIALNKNFVKVMSWYDNEYGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.319e-30
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVR+EK A+Y++IK A+K  ++G LKG+L YTEDDVVSTD  G+  SSIFDAKAGI+L+  FVKLVSWYDNEWGYS
Sbjct:  235 PTSNVSVVDLTVRIEKGATYEQIKTAVKKAADGPLKGVLAYTEDDVVSTDMNGNPNSSIFDAKAGISLNDHFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.559e-30
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            P+ +VSV+DLTVRLEK ASY+EI +AIK  ++G+LKGI+ YT D+VVSTD +G+N SSIFD KAGI+L+  FVKLVSWYDNEWGYS
Sbjct:  235 PSANVSVIDLTVRLEKAASYEEITSAIKKAADGELKGIMAYTSDEVVSTDMLGNNNSSIFDIKAGISLNPNFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.559e-30
Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT R+EK A+YDEIK  IK  SEG L GIL YTED+VVS+D  G+  SSIFDAKAGI+L+K FVKLVSWYDNEWGYS
Sbjct:  235 PTANVSVVDLTARIEKGATYDEIKEVIKKASEGPLAGILAYTEDEVVSSDMNGNPASSIFDAKAGISLNKNFVKLVSWYDNEWGYS 320          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.249e-29
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVRLEK A YDEIK  +KA ++G +KGILGYTE  VVSTDF GD RSSIFDA AGIAL+  FVKLV+WYDNE+GYS
Sbjct:  234 PTPNVSVVDLTVRLEKPAKYDEIKKVVKAAADGPMKGILGYTEHQVVSTDFNGDCRSSIFDAGAGIALNDHFVKLVTWYDNEFGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.631e-29
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT DVSVVDL VRLEK ASY++IK  ++  +EG+ KGI+ YT++DVVSTDF+ DN S +FDAKAGI LS  FVKL++WYDNEWGYS
Sbjct:  234 PTQDVSVVDLVVRLEKPASYEQIKEVMRKAAEGEYKGIIAYTDEDVVSTDFISDNNSCVFDAKAGIQLSPNFVKLIAWYDNEWGYS 319          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.781e-29
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVRL K A+YDEIKA +   S+G +KGIL YTE++VVSTDFVGD  SS+FDAKAGI L+ +FVKL+SWYDNE+GYS
Sbjct:  233 PTPNVSVVDLTVRLGKSATYDEIKAKVLEASQGPMKGILDYTEEEVVSTDFVGDTHSSVFDAKAGIPLNDKFVKLISWYDNEFGYS 318          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.633e-29
Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLT R+EK A+YDEIK AIK  +  +L+GIL YTED++VSTD +G+N SSIFDAKAGI+L+  FVKLV+WYDNEW YS
Sbjct:  236 PTANVSVVDLTCRIEKSATYDEIKKAIKIAAGNELQGILSYTEDEIVSTDLIGNNHSSIFDAKAGISLNDNFVKLVAWYDNEWAYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 3.633e-29
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVR+EK ASY+EI   IK  ++G LKG+L YT DDVVS+D +G+  SSIFD KAGI+L+K FVKLVSWYDNEWGYS
Sbjct:  236 PTANVSVVDLTVRIEKGASYEEITETIKKAADGPLKGVLAYTGDDVVSSDMLGNTNSSIFDIKAGISLNKNFVKLVSWYDNEWGYS 321          
BLAST of FK826684 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 3.633e-29
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = -1
Query:    1 PTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSKEFVKLVSWYDNEWGYS 258
            PT +VSVVDLTVRL K ASYDEIKA ++  + G LKGILGYT+++VVSTDF+ D  SS+FDAKAGI+L+ +FVKL+SWYDNE+GYS
Sbjct:  233 PTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYS 318          
The following BLAST results are available for this feature:
BLAST of FK826684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
G3P1_TRIKO5.604e-3072.09Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_CRYPA7.319e-3070.93Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_TRIAT9.559e-3069.77Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P_NEUCR9.559e-3073.26Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_DANRE1.249e-2974.42Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P2_AGABI1.631e-2967.44Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_GLOMM2.781e-2970.93Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_ERYGR3.633e-2968.60Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3P2_TRIKO3.633e-2969.77Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P2_DROPS3.633e-2969.77Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]

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Properties
Property NameValue
Genbank descriptionclone284 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 284, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826684 ID=FK826684; Name=FK826684; organism=Citrus sinensis; type=EST; length=258bp
ACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAAATTCCT
TACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTATTGTCA
CCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAAGATACC
CTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTTCATCAT
AAGAAGCATCCTTCTCCAGCCTCACTGTGAGGTCAACCACTGAGACATCA
ACAGTGGG
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