EY684760

Overview
NameEY684760
Unique NameEY684760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY684760_ssr183 microsatellite EY684760_ssr183:183..192. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.660e-15
Identity = 44/72 (61.11%), Postives = 49/72 (68.06%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSD-RDEFLILASDGLWDVVSNEAACQVVRRCF--SGRIKWASSVDAGNQNP 470
            +GD YLKP+VI  P+V V ER D  DEFLILASDGLWDVVSNE AC VVR C   SGR +   S    N +P
Sbjct:  265 IGDSYLKPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNEVACNVVRACLRSSGRRERNRSSPTSNLSP 336          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.305e-14
Identity = 46/111 (41.44%), Postives = 58/111 (52.25%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCF------SGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 578
            +GDQYL+PFVI  P+V    R+  DE LILASDGLWDV+SN+ AC   RR        +G +  A     G                I  GS DNIS+IV++L    KF +
Sbjct:  400 IGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAER-GVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKAQRKFKT 509          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKW--------ASSVDAGNQNPXXXXXXXXXXXXIS--RGSSDNISVIVVELNKPTKFNS 578
            +GD+YLKP++I  P++ +  R+  DE L+LASDGLWDV+SNE  C V R+     + W        AS+  +G+ +             ++  +GS DNISVIVV+L    KF S
Sbjct:  354 IGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRI---LLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKAHRKFKS 465          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.616e-14
Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDA--------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 578
            +GD+YLKP+VI +P+V    RS  DE LILASDGLWDV++N+  C++ RR     + W     A        G                + +GS DNIS+IV++L    KF +
Sbjct:  400 IGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKT 509          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDA----------GNQNPXXXXXXXXXXXXISRG--SSDNISVIVVELNKPTK 569
            +GD+YLKP V  +P+V    R   DE L+LASDGLWDV+S++ AC + R C   R +  SS+D           G QNP            ++ G  SSDNISV+V++L   ++
Sbjct:  305 IGDRYLKPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIARFCL--REETPSSLDLNRMAQEDDNDGEQNPSRSVLAATLLTRLALGRQSSDNISVVVIDLKNSSQ 416          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCF----------SGRIKWASSVDAG---------NQNPXXXXXXXXXXXXISRGSSDNISVIVVEL 554
            +GD+YLKP VI +PD+ +T R+  DE LILASDG+WDV+SNE A  V R+C           + R   A+S  AG         ++              + R SSDNISV+V++L
Sbjct:  355 LGDKYLKPEVICEPDITITVRTVDDECLILASDGMWDVISNETASDVARQCLEDGSPTSGRRAARSGEAASSSAGAPAAAVGQESEPRCYRAAALLARLALGRESSDNISVVVIDL 470          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.063e-12
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKW-----------ASSVDAGNQNP-XXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 578
            +GD+YLKP++I  P+V V  R+  D+ LILASDGLWDV+SNE  C   R+     + W           ++ +   + +P             + +GS DNI+V+V++L    KF S
Sbjct:  330 IGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRI---LLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHRKFKS 443          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR-RCFSGRIKWASSVDA----------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 578
            +GD+YLKP +I  P+V   +R   D+ LILASDG+WDV+++E AC++ R R      K A + DA          G                I RGS DNISV+VV+L    K  S
Sbjct:  315 IGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKS 430          
BLAST of EY684760 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12
Identity = 45/115 (39.13%), Postives = 58/115 (50.43%), Query Frame = 3
Query:  264 VGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR-RCFSGRIKWASSVDA---------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 578
            +GD+YLKP VI  P+V    R   D+ LILASDGLWDV++NE  C + R R      K A + +A         G                + +GS DNISV+VV+L    KF S
Sbjct:  305 IGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLKGIRKFKS 419          
The following BLAST results are available for this feature:
BLAST of EY684760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
P2C30_ORYSJ6.660e-1561.11Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C07_ARATH3.305e-1441.44Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C06_ORYSJ7.363e-1439.13Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C16_ARATH9.616e-1438.05Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C75_ARATH2.142e-1339.47Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C37_ORYSJ6.233e-1339.66Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C53_ORYSJ1.063e-1235.04Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C56_ARATH4.040e-1238.79Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C77_ARATH9.001e-1239.13Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-C10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684760 ID=EY684760; Name=EY684760; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGACACAAATCACTCACCACTCAATTTAATGAATTGGATAG
TAATATGATTAGCATGATGAGTACATATACATGATGTTATCTTAAGTATA
TTAATTGGCTTGGATAACCGGCTAATTCTTCTTGAGCTAACTTTAGGCCC
ATAAGTTTTTATGATGAGGTTGATTTCATGGAATATATATATTTTTTAAA
ATTATTAAGAAAAGTTCTTATTAGTGCGGTCAATATAACGTGGTATTTGT
AAGTTTGAACCATGTAGGCGATCAATACTTGAAACCATTTGTGATATCAA
AGCCAGATGTGATGGTGACTGAAAGAAGCGACCGCGATGAATTCCTCATA
CTTGCTAGCGATGGCTTATGGGATGTTGTATCAAATGAAGCAGCATGCCA
AGTCGTGAGGAGATGTTTCAGCGGCCGGATAAAATGGGCATCCTCCGTCG
ACGCCGGGAACCAAAACCCCGCTGCCAGAGCAGCAGCAGTGCTGGTCGAG
CTAGCCATCTCTCGGGGCAGCAGTGACAATATAAGCGTCATAGTAGTTGA
GCTAAATAAACCTACCAAGTTTAATTCCTAGTGCATCATAAAATTTAATA
AACAGCAACAGAGTTCGTTTCGAAGATTTTAACCCTTGATTTGTTAAGCG
AAAAACCCGTGGTTTTCCAATCAAAAAATTGAAACCAAAAGCGGCGGGGA
CTCTAGCTGAATTCAACAAGCTTTTCAAGGGAGGCAATTATTTAAATTGC
AAAAAACACCCTGGTTATGATCACTAAGCAGCATCGGCCATTAGTGCCTG
CCCCACACCGCCCCACGACAGAAGACGACACTAAACCGGCAAACAGATGA
TTCACGGAATGCCCAACAGAATCAAACGGAACCAATGCAACAAGCCTCGA
CCCAGCGACGG
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