EY684746

Overview
NameEY684746
Unique NameEY684746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.104e-17
Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 3
Query:   15 DESVSTEN-PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRNRLR 395
            DE+ S EN PRD +L+ ++ ++P V        + N   F++R  EA  +Y ALFD  +ST+ RD+ +R++ E E   R+  N +ACE  DRVER E + +W+ RM  AGF+ K +   + E  R +L+
Sbjct:  467 DETGSEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLK 595          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLR--------------DHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE 344
            +++L  +K ++P +VTLVEQE N N   F+ R NEA  YY  +FDS+ES+                 ++ D V  E  L R++ N VACEG DRVER E   +WR RM  +GF+
Sbjct:  411 EKVLNSIKQINPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFD 524          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMS 359
            D+ L  +K + P ++T+VEQE N N   F+ R  E+  YY +LFDS+E        DRV  E  L R++ N VACEG DRVER E   +WR R  + GF  KP+S
Sbjct:  360 DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP---PSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGF--KPVS 459          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16
Identity = 44/130 (33.85%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   15 DESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRNRLRWG 401
            DE+V   +PRD +L+ ++ ++P+V        N N   F+ R  EA  +Y A+FD  +S + R+   R+  E E   R++ N VACEG +RVER E + +W+AR+  AGF   P+ + + ++++ ++  G
Sbjct:  606 DETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENG 735          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.011e-15
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE 344
            +++L  VK + P +VT+VEQE N N   F+ R  E+  YY  LFDS+E +   +  D++  E  L +++ N VACEG DRVER E   +WR R+  AGF+
Sbjct:  423 EKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECS--PNSQDKMMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFD 520          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLR--DHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE 344
            + +L  VK + P +VT+VEQE N N   F+ R  E+  YY  LFDS+E   +   +  D++  E  L +++ N VACEG +RVER E   +WRAR+  AGF+
Sbjct:  424 ERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERHETLAQWRARLGSAGFD 525          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE-STVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAG 338
            ++++  +K + P +VT+VEQE N N   F+ R  EA  YY  LFDS+E S V     D    E  L R++ N VACEG DRVER E   +WR RM  AG
Sbjct:  383 EKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTRMETAG 481          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 43/123 (34.96%), Postives = 71/123 (57.72%), Query Frame = 3
Query:   39 PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRNRL-RWG 401
            PRD  L+ ++ ++P+V        + N   F  R  EA  +Y ALFD   +T+ +++ +R+  E E   R++ N +ACEG DRVER E + +W+ RM  AGF+ KP+   + +  R ++ +WG
Sbjct:  508 PRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWG 630          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFE 344
            ++++  VK + P ++T+VEQE N N   FM R  E+  YY  LFDS+ES+   ++ D++  E  L +++ N VACEG DRVE  E   +WR R+  +GFE
Sbjct:  430 EKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESS--PNNQDKMMSEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFE 527          
BLAST of EY684746 vs. ExPASy Swiss-Prot
Match: SCL3_ARATH (Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:   45 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGL-SRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRNRLRWGG 404
            D  L  + GLSP V+ + EQ+++ N +  M R+ E+   Y ALFD +E+ V R   DR+KVE+ L   ++ N ++CEG +R ER E   KW  R+ +AGF   P+S       R  L+  G
Sbjct:  330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCG 450          
The following BLAST results are available for this feature:
BLAST of EY684746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SCL34_ARATH4.104e-1737.98Scarecrow-like protein 34 OS=Arabidopsis thaliana ... [more]
GAI_SOLLC5.361e-1741.23DELLA protein GAI OS=Solanum lycopersicum GN=GAI P... [more]
RGL1_ARATH1.194e-1644.76DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1... [more]
SCL14_ARATH7.741e-1633.85Scarecrow-like protein 14 OS=Arabidopsis thaliana ... [more]
GAIP_CUCMA1.011e-1543.00DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=... [more]
GAI1_VITVI1.320e-1542.16DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 ... [more]
GAI_GOSHI2.252e-1545.45DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=... [more]
SCL31_ARATH3.842e-1534.96Scarecrow-like protein 31 OS=Arabidopsis thaliana ... [more]
GAIPB_CUCMA3.842e-1542.00DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB ... [more]
SCL3_ARATH1.460e-1438.02Scarecrow-like protein 3 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-003-B06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684746 ID=EY684746; Name=EY684746; organism=Citrus sinensis; type=EST; length=904bp
CGGACGCGTGGGCGGACGAGAGCGTGTCAACGGAGAATCCGAGGGACGAG
CTGCTCCGGCGTGTAAAGGGGTTGTCACCGAGTGTGGTAACGTTGGTGGA
GCAAGAAACGAACACAAATACGGCGCCGTTCATGGCGCGCGTCAACGAGG
CGTGTGCATATTACGGAGCGTTGTTTGACTCGATCGAGTCGACCGTGCTG
AGAGACCACTCGGACCGAGTCAAAGTCGAGGAAGGGCTGAGTCGTAAATT
GGCTAACTCGGTTGCTTGTGAAGGCAGGGACCGTGTGGAGAGATGCGAGG
TGTTTGGCAAGTGGCGAGCCCGCATGAGGATGGCTGGGTTCGAGTTGAAG
CCAATGAGTCAAATCATTGCCGAGTCAATGCGGAATCGACTGAGGTGGGG
GGGGAAGCGAAAGACCCCCAGGTTCAGCCTCCAAACCAAAACCGACCCCT
TGGCTCTAGCTAGAAAGCAAAAACCCTCACGACACTGACCGGACCACAAG
AAAATAGACCCGCAAGAGCAAAAAGAATGACCTACGCGAGCCGGGGTGGC
AGCACGGACGCGAGTGCACAACCACGACACCACCGGAACGCCACGGACAC
AGAAAGGGACCCCGGAAAAAAACAACACGCGACACAACCCCACGGAGAGA
AAGCGAGAGGGCGGAAAAAACACAGACCCCCTACCAGAGCCACAAACAAA
GGAAACCACCCACACACAAAGATCACGAGGCACAGACACGCAGGCGGCAG
CGTGCAGAAACACGGAGCTTGAGACAACAAGAGAGAGCAGAAAAACGGGT
GAAGAGAAACAGAAGCGGCCAATAAACAACAAAAAAAAGAACGAAAGCAA
CAGATCAGAGAAAGGACGCAACGAGACGCAACAAAGGGGGAGAAGAAGTA
ACAC
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