EY659701

Overview
NameEY659701
Unique NameEY659701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 3
Query:   81 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            GTEC VCL+ F + E +R L  C H+FH +CID WL SH NCP+CR
Sbjct:  132 GTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL1M_ARATH (RING-H2 finger protein ATL1M OS=Arabidopsis thaliana GN=ATL1M PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 3
Query:   81 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            G EC VCLS   DG+  R L  C H FH  CIDMW +SHS CP+CR
Sbjct:  117 GLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 3
Query:   81 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            G EC +CL+ F D E +R +  C H+FHASCID+WL S S CP+CR
Sbjct:  125 GVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 3
Query:   45 LKYMKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            + Y +E ++  +G EC +CLS F  GE +R L  C H FH  CID WL+ H  CP CR
Sbjct:  120 VSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL1F_ARATH (RING-H2 finger protein ATL1F OS=Arabidopsis thaliana GN=ATL1F PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 3
Query:   69 VKDVGTE-CPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            VKD GT+ C +CL+ F D + +R +S C HSFH  CID+W + H  CP+CR
Sbjct:  146 VKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCR 196          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query:   69 VKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            +K   TEC +CL  F +GE VR L  C H FH  CID WL SHS+CP CR
Sbjct:  106 LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 3
Query:   81 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            G EC +CLS F D E +R +  C H+FHA+CID+WL S S CP+CR
Sbjct:  120 GVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 3
Query:   84 TECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            TEC +CL+ FADGE +R L  C HSFH  CID WL S S+CP CR
Sbjct:  100 TECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 27/58 (46.55%), Postives = 34/58 (58.62%), Query Frame = 3
Query:   45 LKYMKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            + Y  E ++  +G EC +CLS F  GE +R L  C H FH  CID WL+ H  CP CR
Sbjct:  121 VSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178          
BLAST of EY659701 vs. ExPASy Swiss-Prot
Match: ATL4B_ARATH (Putative RING-H2 finger protein ATL4B OS=Arabidopsis thaliana GN=ATL4B PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 3
Query:   81 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 218
            G EC +CLS F D E +R +  C H+FHA+CID+WL S S CP CR
Sbjct:  120 GVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165          
The following BLAST results are available for this feature:
BLAST of EY659701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ATL5F_ARATH1.481e-1158.70RING-H2 finger protein ATL5F OS=Arabidopsis thalia... [more]
ATL1M_ARATH1.481e-1158.70RING-H2 finger protein ATL1M OS=Arabidopsis thalia... [more]
ATL1H_ARATH1.481e-1156.52RING-H2 finger protein ATL1H OS=Arabidopsis thalia... [more]
ATL1J_ARATH1.934e-1146.55RING-H2 finger protein ATL1J OS=Arabidopsis thalia... [more]
ATL1F_ARATH1.934e-1150.98RING-H2 finger protein ATL1F OS=Arabidopsis thalia... [more]
ATL5B_ARATH2.526e-1156.00RING-H2 finger protein ATL5B OS=Arabidopsis thalia... [more]
ATL4C_ARATH2.526e-1156.52Putative RING-H2 finger protein ATL4C OS=Arabidops... [more]
ATL2A_ARATH2.526e-1162.22RING-H2 finger protein ATL2A OS=Arabidopsis thalia... [more]
ATL1I_ARATH2.526e-1146.55RING-H2 finger protein ATL1I OS=Arabidopsis thalia... [more]
ATL4B_ARATH3.300e-1156.52Putative RING-H2 finger protein ATL4B OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659701 ID=EY659701; Name=EY659701; organism=Citrus sinensis; type=EST; length=650bp
CCACGCGTCCGAAAGCGAACTACCGCACGGAGATGGCATCGGGGCTCAAG
TATATGAAGGAGGCCCATGTTAAGGACGTGGGCACCGAGTGTCCCGTTTG
CTTGTCTGCGTTCGCTGACGGCGAAGTGGTTCGGCAGCTGAGCGCGTGTA
AACACTCTTTCCATGCTTCTTGCATCGACATGTGGTTGAAATCTCACTCC
AATTGTCCGATCTGTCGCGCTCCCGTTCCCGCCAAGCCCCCTAATAATAA
CAACGCCGCCCCGCCGCGAGAAATCACACGGTTTACATGGCCCATCCTGC
GGCCACTAAGCGTCCAAGTGGCTGCATCGTTAGGTGGAAGATGAGACGCT
GACTTCACTATTCAGTTAGGTATCAACATATCATTATTGGCCGGCTACTT
GGGGTAATGATATACCGTAAATGAATTTGAGTCTTTTGGCTGATGACGAA
AGTGAAAATGAGAAACTTTGATGATGAATTGATGATGAGTGGTGCCTGTC
AATTACTTGACTGCTTGTGCTTTTGCTCACCAGCTTTCATTTGTTCATTA
CTTTGTTTTCTTTGCATTTTGCGCTTCCATTTTGGACTTCTTGTCTGCTT
CTTCAGATATATAAGGGATCCTGACTTGAAAAAAAAAAAAAAAAAAAAAA
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