EY659675

Overview
NameEY659675
Unique NameEY659675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659675_ssr104 microsatellite EY659675_ssr104:104..117. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659675_ssr123 microsatellite EY659675_ssr123:123..134. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9805 contig Csv1_Contig9805:8..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659675 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.302e-11
Identity = 53/222 (23.87%), Postives = 94/222 (42.34%), Query Frame = 3
Query:  159 LGTESNNNTDPQNQKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDLK------------VSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRY--TIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPAATRSCLTSFPEVFINGGILLGYVWNYGXLQLPLHLGWRMMLGIGAISSVLLAVGV 782
            +G+  +   D  N    A   P+K     +  S   ++ +    + G+D G +SG      D ++            +S+ +  +++ I NI   IG +   +  D  GRR    IV                  Y + +G R ++G+GVG   +++P+  +E +P   R  L SF ++ I  GI LGY  NYG       + WR+ LG+    ++ +  G+
Sbjct:   31 VGSRDDLKVDDDNHSVDAIELPKKPRSAYITVSILCLMVAFGGFVFGWDTGTISGFVNQT-DFIRRFGQEKADGSHYLSNVRTGLIVSIFNIGCAIGGIILSKLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIG-RIISGLGVGGISVLSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTYSNSVQWRVPLGLCFAWAIFMITGM 250          
BLAST of EY659675 vs. ExPASy Swiss-Prot
Match: HXT4_YEAST (Low-affinity glucose transporter HXT4 OS=Saccharomyces cerevisiae GN=HXT4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 47/200 (23.50%), Postives = 86/200 (43.00%), Query Frame = 3
Query:  222 PQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAAL-----------YIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGIGVGYALMIAPVYTAELSPAATRSCLTSFPEVFINGGILLGYVWNYGXLQLPLHLGWRMMLGIGAISSVLLAVGV 782
            P+K     +  S   ++ +    + G+D G +SG              +      +S  +  +++ I NI   IG +   +  D  GR+  ++                 N  Y + +G R ++G+GVG   +++P+  +E+SP   R  L S  ++ I  GI LGY  NYG       + WR+ LG+G   ++ +  G+
Sbjct:   61 PKKPASAYVTVSICCLMVAFGGFVFGWDTGTISGFVAQTDFIRRFGMKHHDGTYYLSKVRTGLIVSIFNIGCAIGGIILAKLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIG-RIISGLGVGGIAVLSPMLISEVSPKHIRGTLVSCYQLMITLGIFLGYCTNYGTKTYTNSVQWRVPLGLGFAWALFMIGGM 259          
BLAST of EY659675 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 47/166 (28.31%), Postives = 77/166 (46.39%), Query Frame = 3
Query:  285 SILLGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALMIAPVYTAELSPAATRSCLTSFPEVFINGGILLGYVWNYGXLQLPLHLGWRMMLGIGAISSVLLAVGV 782
            S + G  IG  S     +  +L +S  +  +   IL I ++IG+  +GR +D IGRR T+                     +L  GRF+ G G+G    + PVY AE++P   R   T+  ++ I  G+ + Y+       L   +GWR++  IG I  V+  +G+
Sbjct:   43 SFVFGSAIGYSSPVQSDLTKELNLSVAEYSLFGSILTIGAMIGAAMSGRIADMIGRRATMGFSEMFCILGWLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYL-------LGSFIGWRILALIGMIPCVVQMMGL 201          
The following BLAST results are available for this feature:
BLAST of EY659675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
KHT2_KLULA6.302e-1123.87Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
HXT4_YEAST8.230e-1123.50Low-affinity glucose transporter HXT4 OS=Saccharom... [more]
ERDL5_ARATH8.230e-1128.31Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659675 ID=EY659675; Name=EY659675; organism=Citrus sinensis; type=EST; length=810bp
TACACTTCACACACAAGGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCT
TGAGTTTCTATCTCTTCTTCCAAACCCTAGCTTACATAATTAAACACTCG
CAGTCTCTCTCTCTCTCGCTCTCTAGCTAGCTAGCTTAGCAACAACATGG
CTGCAGGCTTGGGAACCGAGAGCAACAACAATACTGACCCTCAAAACCAA
AAAACTCTTGCGGATTTTGATCCCCAAAAGAAACCAAAAAGAAATCTGTA
TGCCTCCGGCGCTGCCATTTTGGCTTCCATGACTTCAATCTTACTAGGTT
ATGACATTGGAGTAATGAGTGGAGCTGCACTCTACATCAAAGACGACTTG
AAAGTCAGTGACACAAAAATCGAGATCTTAATGGGAATCTTGAATATTTA
CTCACTCATCGGCTCACTGGCTGCCGGCAGAACCTCCGACTGGATTGGCC
GCCGGTACACTATCGTGTTAGCCGGGGCCATCTTCTTCGCCGGAGCGCTG
CTCATGGGGTTCGCCACAAACTACGCTTTCCTCATGGGGGGTCGCTTCGT
CGCCGGTATCGGCGTCGGATACGCTCTCATGATCGCTCCCGTTTACACAG
CTGAACTTTCTCCGGCTGCTACTCGAAGCTGTCTCACCTCATTTCCTGAG
GTTTTCATTAACGGCGGGATATTACTGGGCTACGTCTGGAACTACGGATT
NCTGCAACTACCCCTNCACTTAGGCTGGCGCATGATGCTCGGAATCGGCG
CCATTTCGTCGGTGCTTCTCGCCGTCGGCGTGTAACCATGCCAGATCTCC
GCGCTGGCTG
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