EY659673

Overview
NameEY659673
Unique NameEY659673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659673_ssr70 microsatellite EY659673_ssr70:70..84. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659673 vs. ExPASy Swiss-Prot
Match: FRK_RAT (Tyrosine-protein kinase FRK OS=Rattus norvegicus GN=Frk PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  130 EVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT------DGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVV 567
            E  ++ ++ HP ++ L      +D  +I+ ELM + SL   L     GS +    ++ +A   A G+ YL        IHRDL + N+L+      K++DFGLA        D  ++K+ +KL   + + APE +   K + KSDV++FG++
Sbjct:  278 EAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDG-GSKIRLTQQVDMAAQVASGMAYLESQ---NYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKL--PVKWTAPEAIRTNKFSIKSDVWSFGIL 423          
BLAST of EY659673 vs. ExPASy Swiss-Prot
Match: DUSTY_XENTR (Dual serine/threonine and tyrosine protein kinase OS=Xenopus tropicalis GN=dstyk PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  274 SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVV 567
            + L+   R++IALD   G+ +LH   N  ++HRD+K  N+LLD K  AK++D G    +   + +   + GT  ++APE L  GK  +  DVYAFG++
Sbjct:  738 TGLSLETRLQIALDVVEGIRFLH---NQGLVHRDIKLKNVLLDKKHRAKITDLGFCKPEAMMSGS---IVGTPIHMAPE-LFSGKYDNSVDVYAFGIL 828          
BLAST of EY659673 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  124 QNEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL--DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL--KLSGTLGYVAPEYLL----DGKLTDKSDVYAFGVV 567
            + E+  L  + HPNVV L   SA     ++V E +    L   I L G      L+     K+       + Y HE     V HRDLK  N+L+D+K N K+SDFGL+    +Q K+ L     G+  Y+APE LL    DG L   SD+++ GV+
Sbjct:  133 KREIATLKLLKHPNVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGK-----LSEKEGRKLFQQLMDAVSYCHEK---GVYHRDLKPENVLVDAKGNIKVSDFGLSALPQNQRKDGLLHTTCGSPNYIAPEVLLNRGYDGSL---SDIWSCGVI 277          
BLAST of EY659673 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  130 EVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQ--LHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGKL-TDKSDVYAFGVV 567
            E+ LL  +HHPN+VCL      D   ++++E +   S+D++  L     G  L             +G+ + H      V+HRDLK  N+L+D K   KL+DFGLA   G   +       TL Y +PE LL   L +   D+++ G +
Sbjct:   51 EISLLKELHHPNIVCLQDVLMQDARLYLIFEFL---SMDLKKYLDTIPSGQYLDRSRVKSYLYQILQGIVFCHSR---RVLHRDLKPQNLLIDDKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVLLGSALYSTPVDIWSIGTI 193          
The following BLAST results are available for this feature:
BLAST of EY659673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
FRK_RAT7.668e-1130.26Tyrosine-protein kinase FRK OS=Rattus norvegicus G... [more]
DUSTY_XENTR7.668e-1137.76Dual serine/threonine and tyrosine protein kinase ... [more]
CIPKL_ORYSJ7.668e-1135.26CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CDC2_CHICK7.668e-1131.54Cell division control protein 2 homolog OS=Gallus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659673 ID=EY659673; Name=EY659673; organism=Citrus sinensis; type=EST; length=918bp
CAACACAATATGCCGGCAGAGAATTTGAGGTACTATTTGTTTAAGGGGAT
TTATAAATTTTGAAATCTATGTTGTTGTTGTTGTAGTTGTTGTGCTGTTC
TAATTTTGAGTTGTTTGTGATTGCAGAATGAGGTGGATTTGCTGAGTAAT
ATTCACCACCCAAATGTTGTTTGTCTGTTGGGTTATAGTGCTCATGATGA
CACAAGGTTTATTGTTTATGAATTGATGGAAAATCGGTCCCTTGATATTC
AATTGCATGGTCCTTCTCATGGATCAGCATTGACTTGGCATATGCGAATG
AAAATTGCTCTTGATACCGCTAGAGGATTAGAATATTTACATGAGCACTG
CAACCCTGCAGTCATTCATAGAGATCTGAAATCCTCCAATATACTTCTAG
ATTCCAAGTTTAATGCTAAGCTCTCAGATTTTGGTCTTGCCATAACCGAT
GGATCCCAAAACAAGAACAATCTTAAGCTTTCGGGCACTTTGGGATATGT
GGCTCCCGAGTATCTTTTAGATGGTAAATTGACAGACAAGAGTGATGTCT
ATGCTTTTGGAGTTGTGCTTCTTGAACTTCTCTTATGATGATGCCAGTGG
AGATACTGGCACCAGCTCAGTGCCAATCTATTGTCACATGGGCCATGCCT
CAACTCACTGACAGNATCTAACTCCNATACATTGTGGATCCTGTGATTAA
AAGTACCATGGATTTAAAGCATTTATACCANGTTGCAGCTGTTGCTGGGT
TATGTGTGCAACCGGAGCCAAGTATCGACACTGATTACNGGATGTTTGCA
CTCTCTTATTCCACTCGTCCAGTGGAGCCTGGNAGGACTCTGGAGGTTGC
ACCATCTGGACCTNCTGCAAACTCCACTATACTTCTGGACACTGATTGCT
GACGCATGAACATTTTTT
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