EY659664

Overview
NameEY659664
Unique NameEY659664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.892e-84
Identity = 157/264 (59.47%), Postives = 189/264 (71.59%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEY----------SSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NL+++  T+KIIAEYIWIGG+G+D+RSK++T+  PV  PS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR GNNILV+CD YTPAGEPIPTNKR+ AA+IFS+ +V+AE PW+GIEQEYTLLQ++  WPLGWP+G +PGPQGPYYCG GA+KSF RDI DAHYKACLYA              PG++          SS  Q         +W  R  LERI + AGVV +  P  + G+       TN  T +
Sbjct:    4 LTDLVNLNLSDTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYA--GINISGINGEVMPGQWEFQVGPSVGISSGDQ---------VWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTES 256          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 7.188e-84
Identity = 154/260 (59.23%), Postives = 191/260 (73.46%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEI------ILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NL+++  T+KIIAEYIW+GG+G+D+RSK++T+S PV  PS+LPKWNYDGSSTGQAPG+DSEVIL+PQAIFKDPFR GNNILVICDTYTP+G+PIPTNKRH AA+IFS+  V+AE PWFGIEQEYTLLQ+++ WP+G  +G +PGPQGPYYCG GA+K+F RDI D+HYKACLYA              PG++        + P I       LW  R  LERI + AGVV SL P  + G+       TN  T++
Sbjct:    4 LSDLINLNLSDTTEKIIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFRRGNNILVICDTYTPSGKPIPTNKRHAAAKIFSHPDVAAEEPWFGIEQEYTLLQKDIHWPIGMALGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYA--GINISGINAEVMPGQWEF-----QVGPSIGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKS 256          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_PHAVU (Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 7.188e-84
Identity = 147/238 (61.76%), Postives = 180/238 (75.63%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL 807
            L DL+NL+++  T+KIIAEYIW+GG+G+D+RSK++T+  PV+ P++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFR GNNILVICD YTPAGEP+PTNKR+ AA+IFS+  V AEVPW+GIEQEYTLLQ++V WPLGWP+G YPGPQGPYYCG GADK++ RDI DAHYKAC+YA              PG++         +     +W  R  LERI + AG V S  P  +
Sbjct:    4 LSDLINLNLSESTEKIIAEYIWVGGSGMDLRSKARTLPGPVDDPAKLPKWNYDGSSTDQAPGDDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYDAAKIFSHPDVVAEVPWYGIEQEYTLLQKDVNWPLGWPLGGYPGPQGPYYCGVGADKAYGRDIVDAHYKACVYA--GINISGINGEVMPGQWEFQVGPSVGISAGDEVWAARYILERITELAGAVVSFDPKPI 239          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA3_PEA (Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.601e-83
Identity = 146/241 (60.58%), Postives = 181/241 (75.10%), Query Frame = 1
Query:   88 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL 807
            ++ L DL+N +++  T+KIIAEYIW+GG+GID+RSK++T+  PV  P++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFR GNNILVICD YTPAGEP+PTNKR+ AA+IFS+  V+AEVPW+GIEQEYTLLQ+++ WPLGWP+G YPG QGPYYCG GADK++ RDI DAHYKACL+A              PG++         +     +W  R  LERI + AGVV S  P  +
Sbjct:    1 MSSLSDLINFNLSDSTEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTNQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLLQKDINWPLGWPIGGYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFA--GINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPI 239          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.659e-83
Identity = 145/241 (60.17%), Postives = 181/241 (75.10%), Query Frame = 1
Query:   88 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL 807
            ++ L DL+N +++  T+KIIAEYIW+GG+GID+RSK++T+  PV  P++LPKWNYDGSST QAPG+DSEVILYPQAIFKDPFR GNNILVICD YTPAGEP+PTNKR+ AA+IFS+  V+AEVPW+GIEQEYTLLQ+++ WPLGWP+G YPG QGPYYCG GADK++ RDI DAHYKACL+A              PG++         +     +W  R  LERI + +GVV S  P  +
Sbjct:    1 MSSLSDLINFNLSDSTEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTDQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLLQKDINWPLGWPIGGYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFA--GINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEISGVVVSFDPKPI 239          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.659e-83
Identity = 152/255 (59.61%), Postives = 182/255 (71.37%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DLLNLD++  T+KIIAEYIWIGG+G+D+RSK++ +  PV HPS+LPKWNYDGSSTGQAPGEDSEVILYPQAI KDPFR GNNILV+CD YTP GEPIPTNKR+ AA+I SN  V+ E PW+GIEQEYTLLQ+++ WPLGWPVG +PGPQGPYYCG GADKSF RDI D+HYKACL+               PG++         +     +W  R  LERI + AGVV +  P  + G+       TN  T +
Sbjct:    4 LTDLLNLDLSGSTEKIIAEYIWIGGSGMDLRSKARHLPGPVTHPSKLPKWNYDGSSTGQAPGEDSEVILYPQAILKDPFREGNNILVMCDCYTPRGEPIPTNKRYNAAKILSNPDVAKEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLFG--GVNISGINGEVMPGQWEFQVGPTVGISAGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTES 256          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLN13_ARATH (Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.659e-83
Identity = 151/244 (61.89%), Postives = 178/244 (72.95%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEY----------SSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVP 798
            L DL+NL++T  T KIIAEYIWIGG+G+D+RSK++T+  PV  PS+LPKWNYDGSSTGQA GEDSEVILYPQAIFKDPFR GNNILV+CD YTPAG+PIPTNKRH AA+IFS+  V+ E PW+GIEQEYTL+Q++V WP+GWPVG YPGPQGPYYCG GADK+  RDI DAHYKACLYA              PG++          SS  Q         +W  R  LERI + +GV+ S  P
Sbjct:    4 LSDLVNLNLTDATGKIIAEYIWIGGSGMDIRSKARTLPGPVTDPSKLPKWNYDGSSTGQAAGEDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGDPIPTNKRHNAAKIFSHPDVAKEEPWYGIEQEYTLMQKDVNWPIGWPVGGYPGPQGPYYCGVGADKAIGRDIVDAHYKACLYA--GIGISGINGEVMPGQWEFQVGPVEGISSGDQ---------VWVARYLLERITEISGVIVSFDP 236          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 2.312e-82
Identity = 148/255 (58.04%), Postives = 183/255 (71.76%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NLD++  T+KIIAEYIWIGG+G+D+R K++T+  PV  PSELPKWNYDGSSTGQAPG+DSEVILYPQAIFKDPFR GN+ILV+CD Y+PAGEPIPTNKRH AA++FS+  V AE  W+GIEQEYTLLQ+++ WPLGWP G YPGPQGPYYC  GADK+F RD+ +AHYKACL+A              PG++         +     +W  R  LERI + AGVV +  P  + G+       TN  T++
Sbjct:    3 LSDLINLDLSGTTEKIIAEYIWIGGSGLDLRCKARTLPGPVTDPSELPKWNYDGSSTGQAPGQDSEVILYPQAIFKDPFRRGNHILVMCDAYSPAGEPIPTNKRHAAAKVFSHPDVVAEETWYGIEQEYTLLQKDINWPLGWPAGGYPGPQGPYYCSVGADKAFGRDVVEAHYKACLFA--GINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEVAGVVLTFDPKPIKGDWNGAGAHTNYSTKS 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA1_SOYBN (Glutamine synthetase cytosolic isozyme 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.944e-82
Identity = 150/255 (58.82%), Postives = 183/255 (71.76%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NL+++  T+K+IAEYIWIGG+G+D+RSK++T+  PV  PSELPKWNYDGSSTGQAPGEDSE I Y    F+DPFR GNNILVICD YTPAGEPIPTNKRH AA++FS+  V AEVPW+GIEQEYTLLQ++++WPLGWPVG +PGPQGPYYCG GADK+F RDI DAHYKAC+YA              PG++         +     +W  R  LERI + AGVV S  P  + G+       TN  T++
Sbjct:    4 LSDLINLNLSDTTEKVIAEYIWIGGSGMDLRSKARTLPGPVSDPSELPKWNYDGSSTGQAPGEDSEAI-YTHKPFQDPFRRGNNILVICDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYTLLQKDIQWPLGWPVGGFPGPQGPYYCGVGADKAFGRDIVDAHYKACIYA--GINISGINGEVMPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKS 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 5.151e-82
Identity = 150/261 (57.47%), Postives = 185/261 (70.88%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEII-------LWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NLD++  TDK+IAEYIW+GGTG+D+RSK++T+S PV+ PS+LPKWN+DGSSTGQA G+DSEVIL+PQAIF+DPFR G NILV+CD Y P GEPIPTN R+ AA IFS+  V AE PW+GIEQEYTLLQ+++ WPLGWP+G YPGPQGPYYC AGADKS+ RDI DAHYKACL+A              PG      QW   +  ++       +W  R  LERI + AGVV S  P  + G+       TN  T++
Sbjct:    6 LTDLVNLDLSESTDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYYCAAGADKSYGRDIVDAHYKACLFA--GINISGINAEVMPG------QWEFQIGPVVGVSAGDHVWVARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKS 258          
The following BLAST results are available for this feature:
BLAST of EY659664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA4_MAIZE1.892e-8459.47Glutamine synthetase root isozyme 4 OS=Zea mays GN... [more]
GLNA3_LUPAN7.188e-8459.23Glutamine synthetase nodule isozyme (Fragment) OS=... [more]
GLNA2_PHAVU7.188e-8461.76Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE... [more]
GLNA3_PEA1.601e-8360.58Glutamine synthetase root isozyme A OS=Pisum sativ... [more]
GLNA4_PEA4.659e-8360.17Glutamine synthetase root isozyme B OS=Pisum sativ... [more]
GLNA3_HORVU4.659e-8359.61Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1[more]
GLN13_ARATH4.659e-8361.89Glutamine synthetase cytosolic isozyme 1-3 OS=Arab... [more]
GLNA1_PEA2.312e-8258.04Glutamine synthetase nodule isozyme OS=Pisum sativ... [more]
GLNA1_SOYBN3.944e-8258.82Glutamine synthetase cytosolic isozyme 1 OS=Glycin... [more]
GLN13_ORYSJ5.151e-8257.47Glutamine synthetase cytosolic isozyme 1-3 OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659664 ID=EY659664; Name=EY659664; organism=Citrus sinensis; type=EST; length=951bp
CAATGGCTTATGAAGCAGAACAAGAAAGGAACAACTAGGAGTTCTGCCAA
GTTTAGAGTGCTTGCTTTGAAATCTGAAGACAGCACTGTCAATAGGCTAG
AGGATCTACTCAATTTGGACATCACTCCATATACTGACAAAATCATTGCC
GAATATATTTGGATTGGAGGTACTGGGATTGATATGCGTAGCAAGTCAAA
GACCATTTCAAAGCCTGTTGAGCATCCATCTGAGCTTCCCAAGTGGAATT
ATGATGGATCAAGTACTGGACAGGCACCTGGTGAAGATAGTGAAGTAATT
TTATACCCTCAAGCAATTTTTAAGGACCCCTTCCGTGGAGGAAACAACAT
CTTGGTAATTTGTGATACCTACACACCAGCAGGCGAGCCCATCCCTACAA
ACAAACGCCATAGGGCTGCTGAAATTTTCAGTAACTCGAAAGTGTCTGCT
GAAGTTCCATGGTTTGGGATAGAGCAAGAGTACACCTTACTTCAACAAAA
TGTGAAATGGCCTCTGGGTTGGCCTGTTGGAGCCTATCCTGGTCCCCAGG
GTCCTTATTACTGTGGAGCTGGGGCTGATAAGTCGTTTGCCCGTGACATT
GCAGATGCTCATTACAAAGCTTGCTTGTATGCTGGCATTAACATTATTGG
CACCAACCGGGGAGGTAATGCCTGGCCAGGGGAATATTCAAGTTGGTCCC
AGTGGTAGGCATTGATGCCGGAGATCATATTATGGGGTCCAAGATTACCT
CTTGAGAGAATCCCTGACCAAGCGGGTGTGGTTTTCTCACTGGTCCCAAA
CCAATTGGGGGAAACGGAATGTGGCTGGGTCCCCACCAATTCCGGNACAA
GAGCCCAAGGAGGGAGGAGGCTGTGAACTTTAAGAAGGCGTCTTGGATCC
GGCCTTTCCCTAAAGAAACATCATGGCTATAGGGAAAGAAAGTAGAAAGG
C
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