EY659664

Overview
NameEY659664
Unique NameEY659664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.657e-80
Identity = 149/255 (58.43%), Postives = 182/255 (71.37%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DLLNLD++  T KIIAEYIWIGG+G+D+RSK++T+  PV +P++LPKWNYDGSST QA G+DSEVILYPQAIFKDPFR GNNILV+CD Y PAG+PIPTN RH+A +IF +  V AE PWFGIEQEYTLL+++VKWPLGWP+G +PGPQGPYYC  GADK+F RDI DAHYKACLY+              PG++    S    +     LW  R  LERI +  GV+ S  P  + G+       TN  T++
Sbjct:    5 LSDLLNLDLSD-TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQAIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKAEEPWFGIEQEYTLLKKDVKWPLGWPLGGFPGPQGPYYCAVGADKAFGRDIVDAHYKACLYS--GLSIGGANGEVMPGQWEFQISPTVGIGAGDQLWVARYILERITEICGVIVSFDPKPIQGDWNGAAAHTNFSTKS 256          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.393e-79
Identity = 151/260 (58.08%), Postives = 184/260 (70.77%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEI------ILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NLD++  T KIIAEYIW+GG+G+D+RSK++T+S PV+ PS+LPKWN+DGSSTGQAPG+DSEVIL P+AIF+DPFR G NILV+CD Y P GEPIP+NKRH AA+IFS+  V AE PWFGIEQEYTLLQ++ KWPLGWP+ AYPGPQGPYYC AGADKS+ RDI D  YKACLYA              PG++        + P +       LW  R  LERI + AGVV S  P  + G+       TN  T++
Sbjct:    4 LSDLINLDLSGRTGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLLQKDTKWPLGWPL-AYPGPQGPYYCAAGADKSYGRDIVDCAYKACLYA--GIDISGINGEVMPGQWEF-----QVAPAVGVSAGDQLWVARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKS 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.962e-79
Identity = 151/255 (59.22%), Postives = 181/255 (70.98%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DL+NLD++  TDK IAEYIWI   G  +RSK++T+S PV+ P++LPKWN+DGSSTGQ PG+DSEVI+YPQAIFKDPFR GN+ILV+CDTYTPAGEPIPTNKR  AA+IFS+  V+AEVPWFGIEQEYTLL++ V  P+G P G YPGPQGPYYCG GADK+F RDI DAHYKACLYA              PG++         +     LW  R  LERI + AGVV SL P  + G+       TN  T++
Sbjct:    4 LTDLINLDLSDTTDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNCPIGCPTGGYPGPQGPYYCGIGADKAFGRDIVDAHYKACLYA--GINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKS 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.551e-78
Identity = 145/255 (56.86%), Postives = 179/255 (70.20%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYS-SWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L DLLNLD++  T+K+IAEYIWIGG+G+DMRSK++++S PV    ELPKWNYDGSSTGQA G DSEVILYPQAIF+DPFR G +ILVICD Y+P G  IP+NKR  AA+IF+   VS E  W+G+EQEYTLLQ++VKWPLGWP+G YPGPQGPYYCG GADK++ RDI DAHYKACLY+              PG++         +     LW  R  +ERI ++AGVV S  P  + G+       TN  T++
Sbjct:    5 LTDLLNLDLSDVTEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDAHYKACLYS--GINISGINGEVMPGQWEFQVGPSVGISAADELWCARFIMERITEKAGVVLSFDPKPIEGDWNGAGCHTNYSTKS 257          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.187e-58
Identity = 107/181 (59.12%), Postives = 125/181 (69.06%), Query Frame = 1
Query:  121 ITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTP----------AGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYA 633
            +T    KI AEY+WIGG+  D+RSKS+T+S     P +LP WNYDGSSTGQAPG DSEV L P++IFKDPFRGG+NILV+CD Y P          A +PIPTN R   AE+   +K   E PWFGIEQEYTLL    KWPLGWP G YP PQGPYYC AGA  +  RD+A+ HY+ CL A
Sbjct:   31 VTDQQGKICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVMEKAK--KEEPWFGIEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAA 209          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 211.075 bits (536), Expect = 7.751e-54
Identity = 116/245 (47.35%), Postives = 144/245 (58.78%), Query Frame = 1
Query:  127 PYTDKII-AEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            P  + I+ A Y+WI GTG D+R K +T+    + P ELP WNYDGSS  QA G +S+  LYP AI+KDPFR GNNILV+CDTY   G P  TNKR    E+   +K +AE PWFGIEQEYT L  +   PLGWP   +PGPQGPYYCG GA+K +ARDI DAHY+ACLYA                E+        +     LW  R  L RI ++ G+V +L P  + G+       TN  T+A
Sbjct:   26 PLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEV--ANKCAAEEPWFGIEQEYTFLDFD-GHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQV-GPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKA 266          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.119e-52
Identity = 117/241 (48.55%), Postives = 142/241 (58.92%), Query Frame = 1
Query:  136 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            DKI AEY+WI G G  +R K+ T+SK V    +L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY   G P  TN RH A ++F  +K     PWFG+EQEYTL   + + P GWP G +PGPQGPYYCGAG  K FARD+ +AHY+ACLYA                E+         M +  LW  R  L RI +Q GV  S  P  L GE       TN  T+A
Sbjct:   20 DKIQAEYVWIDGDG-GLRCKTTTVSKKVTDIGQLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNNDGTPNRTNHRHHAKKVFDEAK--EHEPWFGLEQEYTLFDADDQ-PYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGINISGINAEVMPSQWEFQVGPCEGISMGD-HLWMARYLLVRIAEQWGVKVSFHPKPLKGEWNGAGCHTNFSTKA 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.462e-52
Identity = 116/244 (47.54%), Postives = 143/244 (58.61%), Query Frame = 1
Query:  127 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            P  DKI AEY+W+ G G  +RSK+ T+SK V     L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY   G P  TN RH AA++   +K   +VPWFG+EQEYTL   +   P GWP G +PGPQGPYYCGAG  K FARD+ +AHY+ACLY+                E+         M +  LW  R  L RI +Q  V  S  P  L G+       TN  T+A
Sbjct:   17 PQGDKIQAEYVWVDGDG-GLRSKTTTVSKKVTDIGSLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNSDGTPNRTNFRHHAAKVMEQAK--EDVPWFGLEQEYTLFDADGS-PYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYSGINISGINAEVMPSQWEFQVGPCEGISMGD-HLWMARYLLVRIAEQWAVKVSFHPKPLQGDWNGAGCHTNYSTKA 255          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_PANAR (Glutamine synthetase OS=Panulirus argus PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.048e-50
Identity = 110/254 (43.31%), Postives = 151/254 (59.45%), Query Frame = 1
Query:   97 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTRA 855
            L+  L LDI     K  A YIW+ GTG ++RSK++T++   + PSELP WN+DGSSTGQA   +S+V LYP A+++DPFR GNN LV+C+TY    +P  TN+R +  E+   ++ + + PWFG+EQEYTLL  + K PLGWP   YPGPQGPYYCG GA++ + RD+ +AHY+ACL A                E+         M +  LW  R  L R+ +   VV +L P  + G+     + TN  T A
Sbjct:   10 LDRYLRLDIPD--QKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTGQAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVM--TRAADQHPWFGMEQEYTLLDID-KHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVVEAHYRACLCAGINISGENAKVMPAQWEFQVGPCEGITMGD-DLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFSTEA 257          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.868e-50
Identity = 111/240 (46.25%), Postives = 140/240 (58.33%), Query Frame = 1
Query:  136 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQL-GETECGWVPTNSGTR 852
            DK+ AEY+WI G G  +RSK+ T++K      +L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +T+   G P  TN RH   ++   +K S  VPWFG+EQEYTL   +   P GWP G +PGPQGPYYCGAG  K FARD+ +AHY+ACLYA                E+         M +  LW  R  L RI +Q G+  S  P  L G+       TN  T+
Sbjct:   20 DKVQAEYVWIDGDG-GLRSKTMTMTKKTTDIGQLRIWDFDGSSTNQAPGGDSDVYLRPAAIFKDPFRGGDNILVLAETFNNDGTPNRTNHRHHTKKVMDLAKDS--VPWFGLEQEYTLFDAD-GTPFGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMGD-HLWMARYLLVRIAEQWGIKVSFHPKPLAGDWNGAGCHTNYSTK 254          
The following BLAST results are available for this feature:
BLAST of EY659664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLN15_ARATH1.657e-8058.43Glutamine synthetase cytosolic isozyme 1-5 OS=Arab... [more]
GLNA2_MAIZE2.393e-7958.08Glutamine synthetase root isozyme 2 OS=Zea mays GN... [more]
GLNA1_DAUCA6.962e-7959.22Glutamine synthetase cytosolic isozyme OS=Daucus c... [more]
GLNA_PINSY1.551e-7856.86Glutamine synthetase cytosolic isozyme OS=Pinus sy... [more]
GLNA1_CHLRE5.187e-5859.12Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA2_DROME7.751e-5447.35Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_AGABI1.119e-5248.55Glutamine synthetase OS=Agaricus bisporus GN=glnA ... [more]
GLNA_HEBCY1.462e-5247.54Glutamine synthetase OS=Hebeloma cylindrosporum GN... [more]
GLNA_PANAR3.048e-5043.31Glutamine synthetase OS=Panulirus argus PE=2 SV=1[more]
GLNA_SUIBO8.868e-5046.25Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659664 ID=EY659664; Name=EY659664; organism=Citrus sinensis; type=EST; length=951bp
CAATGGCTTATGAAGCAGAACAAGAAAGGAACAACTAGGAGTTCTGCCAA
GTTTAGAGTGCTTGCTTTGAAATCTGAAGACAGCACTGTCAATAGGCTAG
AGGATCTACTCAATTTGGACATCACTCCATATACTGACAAAATCATTGCC
GAATATATTTGGATTGGAGGTACTGGGATTGATATGCGTAGCAAGTCAAA
GACCATTTCAAAGCCTGTTGAGCATCCATCTGAGCTTCCCAAGTGGAATT
ATGATGGATCAAGTACTGGACAGGCACCTGGTGAAGATAGTGAAGTAATT
TTATACCCTCAAGCAATTTTTAAGGACCCCTTCCGTGGAGGAAACAACAT
CTTGGTAATTTGTGATACCTACACACCAGCAGGCGAGCCCATCCCTACAA
ACAAACGCCATAGGGCTGCTGAAATTTTCAGTAACTCGAAAGTGTCTGCT
GAAGTTCCATGGTTTGGGATAGAGCAAGAGTACACCTTACTTCAACAAAA
TGTGAAATGGCCTCTGGGTTGGCCTGTTGGAGCCTATCCTGGTCCCCAGG
GTCCTTATTACTGTGGAGCTGGGGCTGATAAGTCGTTTGCCCGTGACATT
GCAGATGCTCATTACAAAGCTTGCTTGTATGCTGGCATTAACATTATTGG
CACCAACCGGGGAGGTAATGCCTGGCCAGGGGAATATTCAAGTTGGTCCC
AGTGGTAGGCATTGATGCCGGAGATCATATTATGGGGTCCAAGATTACCT
CTTGAGAGAATCCCTGACCAAGCGGGTGTGGTTTTCTCACTGGTCCCAAA
CCAATTGGGGGAAACGGAATGTGGCTGGGTCCCCACCAATTCCGGNACAA
GAGCCCAAGGAGGGAGGAGGCTGTGAACTTTAAGAAGGCGTCTTGGATCC
GGCCTTTCCCTAAAGAAACATCATGGCTATAGGGAAAGAAAGTAGAAAGG
C
back to top