EY659664

Overview
NameEY659664
Unique NameEY659664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_MIMIV (Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.408e-37
Identity = 77/167 (46.11%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  145 IAEYIWIGGTGIDMRSKSKTISKPVEHP---SELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGG-NNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYA 633
            I EY+WIGG G ++RSK++ +   +      S++P WNYDGSST QA G  SEV LYP+ I++ PFR   N ++VICDTY   G P+ TN RH A  IF   K   E PW+G+EQEY + +++   P+G     Y   QG YYC  G+  ++ R I+D H +ACLYA
Sbjct:   20 IIEYVWIGGNG-ELRSKTRVLYSSIMTGYKLSDIPVWNYDGSSTNQANGSSSEVFLYPRNIYRCPFRRNVNGVIVICDTYDVNGVPLETNHRHNANIIF--EKYQNEKPWYGLEQEYFIFRKDTNQPIGM---EYASKQGQYYCSVGSQNAYGRRISDEHMEACLYA 180          

HSP 2 Score: 23.8682 bits (50), Expect = 6.408e-37
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  623 ACMLALTLLAPTG-EVMPGQGNIQVGP 700
            AC+ A   ++ T  EV PGQ   Q+GP
Sbjct:  176 ACLYAGIKISGTNLEVAPGQHEFQIGP 202          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.802e-34
Identity = 76/164 (46.34%), Postives = 97/164 (59.15%), Query Frame = 1
Query:  148 AEYIWIGGTG--IDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYA 633
            AEYIWI GT     +RSK+K I+        LP W +DGSST QA G  S+ +L P     DP RGG++ILV+C+       P  +N R   AE+    + +A+ P FGIEQEYT  Q    +PLG+P G +P PQG YYCG GAD+ F RD+ +AH   CL A
Sbjct:    5 AEYIWIDGTEPTAKLRSKTKIITGQPAGLDALPIWGFDGSSTNQAEGHSSDCVLKPVFTCPDPIRGGDDILVLCEVLNIDLTPHASNTRAALAEV--AERFAAQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKA 164          

HSP 2 Score: 25.409 bits (54), Expect = 2.802e-34
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 2
Query:  626 CMLA-LTLLAPTGEVMPGQGNIQVGP 700
            C+ A L +     EVMPGQ   QVGP
Sbjct:  161 CLKAGLAISGINAEVMPGQWEFQVGP 186          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.139e-31
Identity = 93/243 (38.27%), Postives = 124/243 (51.03%), Query Frame = 1
Query:  142 IIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPV-GAYPGPQGPYYCGAGADKSFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEII---LWGPRLPLERIPDQAGVVFSL-VPNQLGETECGWVPTNSGTRA 855
            I AEYIWI GT    + +SKT  K +   S LP+W +DGSST QA G  S+++L P     DP RGG+++LV+C+       P P+N R     +    + + + P FGIEQEYT L+ +   PLG+P  G YP PQ  YYCG GAD  F R+I + H   CL A              PG++    Q  AL P  +   +W  R  L R+ ++ GV  SL      G+       TN  TRA
Sbjct:    3 IKAEYIWIDGTQPTAKLRSKT--KILSDGSRLPRWGFDGSSTNQAEGHASDLVLEPVFSCPDPIRGGDHLLVLCEVLHTDLTPHPSNTRALLRPV--AERFAGQEPIFGIEQEYTFLKGD--RPLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAA--GLGLSGINAEVMPGQWE--FQVGALPPLEVSDHMWVARWLLHRVAEEFGVTASLDAKPAKGDWNGAGAHTNFSTRA 235          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.874e-29
Identity = 73/162 (45.06%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  148 AEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYA 633
            AEYIWI GT  +   +SKT  + ++   E   W +DGSST QAPG +S+ +L P     DP RGG+N LV+C+       P PTN R  AA +    + +   P FGIEQEYT  +     P GWP   YP PQGPYYCG G  K   R I + H +ACL A
Sbjct:    5 AEYIWIDGTEPEPLMRSKT--RIIKDGKEPEIWGFDGSSTNQAPGSNSDCVLRPVFETPDPIRGGDNRLVLCEVQLTDFTP-PTNTR--AAALGVAERYADMSPMFGIEQEYTFFKDGR--PYGWPEVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDA 159          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.743e-21
Identity = 67/167 (40.12%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  151 EYIWIGGTGIDMRSKSKT-ISKPVEHPS--ELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGE-PIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFARDIADAHYKACLYA 633
            EYIW+ G       + KT I +    P+  +LP W +DGSST QA G  S+ +L P A+F D  R  N +LV+C+   P G+ P  +NKR   A I  ++       WFG EQEY   +     PLG+P   YP PQGPYY G G       AR I + H   CL A
Sbjct:    7 EYIWLDGYTPTPNLRGKTQIKEFASFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAVFPDAAR-TNGVLVMCEVMMPDGKTPHASNKR---ATILDDAGA-----WFGFEQEYFFYKDG--RPLGFPTSGYPAPQGPYYTGVGFSNVGDVARKIVEEHLDLCLAA 162          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.107e-21
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  448 AEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFARDIADAHYKACLYA 633
            A+ PWFGIEQEYTLL    KWPLGWP G YP  QGPYYC  GA +S  RDI + HY+ CL+A
Sbjct:    2 AQEPWFGIEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHA 63          

HSP 2 Score: 23.0978 bits (48), Expect = 7.107e-21
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  659 GEVMPGQGNIQVGP 700
            GEV+P Q   QVGP
Sbjct:   72 GEVLPSQWEYQVGP 85          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.631e-19
Identity = 64/167 (38.32%), Postives = 82/167 (49.10%), Query Frame = 1
Query:  151 EYIWIGGTGIDMRSKSKTISKPVE-HPS--ELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGE-PIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFARDIADAHYKACLYA 633
            EYIW+  T      + KT  K  +  P+  +LP W +DGSST QA G  S+ +L P  ++ DP R  N  LV+C+   P  E P  +N R         + +  E  WFG EQEY   +     PLG+P   YP PQGPYY G G       AR I + H   CL A
Sbjct:    7 EYIWLDATRPYQTLRGKTQIKEFDAFPTLEQLPLWGFDGSSTLQAEGRTSDCVLKPVTVYPDPVR-TNGALVMCEVMMPDAETPHASNTR--------ATVLDDEGAWFGFEQEYFFYKNG--RPLGFPEQGYPAPQGPYYTGVGYKNVGDVARQIVEEHLDICLAA 162          
BLAST of EY659664 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 2.131e-19
Identity = 79/232 (34.05%), Postives = 105/232 (45.26%), Query Frame = 1
Query:  139 KIIAEYIWIGGTGIDMRSKSKTISKPV-EHPS--ELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADK--SFARDIADAHYKACLYAXXXXXXXXXXXXAWPGEYSSWSQW*ALMPEIILWGPRLPLERIPDQAGVVFSLVPNQLGETE 819
            K   EYIW+ G       + KT  K   E P+  +LP W +DGSST QA G  S+ +L P AI+ DP R  N  LV+C+   P G    +N R   A I  +     E  WFG EQEY   Q     PLG+P   YP PQ PYY G G       AR+I + H   CL A                E+  + +      + I W  R  L+R+ ++ G+        LG+T+
Sbjct:    3 KFKLEYIWLDGYTPVPNLRGKTQIKEFDEFPTLEQLPLWGFDGSSTMQAEG-SSDCVLKPVAIYPDPAR-TNGALVMCEVMMPDGHAHASNAR---ATILDD-----EDAWFGFEQEYFFYQNG--RPLGFPEQGYPAPQ-PYYTGVGYSNVGDVAREIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADQI-WMARYLLQRLTEKYGIDIEYHCKPLGDTD 220          
The following BLAST results are available for this feature:
BLAST of EY659664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_MIMIV6.408e-3746.11Putative glutamine synthetase OS=Acanthamoeba poly... [more]
GLNA2_STRVR2.802e-3446.34Glutamine synthetase 2 OS=Streptomyces viridochrom... [more]
GLNA2_STRHY4.139e-3138.27Glutamine synthetase 2 OS=Streptomyces hygroscopic... [more]
GLNA2_FRAAL3.874e-2945.06Glutamine synthetase 2 OS=Frankia alni GN=glnII PE... [more]
GLNA2_BRAJA1.743e-2140.12Glutamine synthetase 2 OS=Bradyrhizobium japonicum... [more]
GLNA_DUNSA7.107e-2164.52Glutamine synthetase (Fragment) OS=Dunaliella sali... [more]
GLNA2_RHIME1.631e-1938.32Glutamine synthetase 2 OS=Rhizobium meliloti GN=gl... [more]
GLNA2_RHILP2.131e-1934.05Glutamine synthetase 2 OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659664 ID=EY659664; Name=EY659664; organism=Citrus sinensis; type=EST; length=951bp
CAATGGCTTATGAAGCAGAACAAGAAAGGAACAACTAGGAGTTCTGCCAA
GTTTAGAGTGCTTGCTTTGAAATCTGAAGACAGCACTGTCAATAGGCTAG
AGGATCTACTCAATTTGGACATCACTCCATATACTGACAAAATCATTGCC
GAATATATTTGGATTGGAGGTACTGGGATTGATATGCGTAGCAAGTCAAA
GACCATTTCAAAGCCTGTTGAGCATCCATCTGAGCTTCCCAAGTGGAATT
ATGATGGATCAAGTACTGGACAGGCACCTGGTGAAGATAGTGAAGTAATT
TTATACCCTCAAGCAATTTTTAAGGACCCCTTCCGTGGAGGAAACAACAT
CTTGGTAATTTGTGATACCTACACACCAGCAGGCGAGCCCATCCCTACAA
ACAAACGCCATAGGGCTGCTGAAATTTTCAGTAACTCGAAAGTGTCTGCT
GAAGTTCCATGGTTTGGGATAGAGCAAGAGTACACCTTACTTCAACAAAA
TGTGAAATGGCCTCTGGGTTGGCCTGTTGGAGCCTATCCTGGTCCCCAGG
GTCCTTATTACTGTGGAGCTGGGGCTGATAAGTCGTTTGCCCGTGACATT
GCAGATGCTCATTACAAAGCTTGCTTGTATGCTGGCATTAACATTATTGG
CACCAACCGGGGAGGTAATGCCTGGCCAGGGGAATATTCAAGTTGGTCCC
AGTGGTAGGCATTGATGCCGGAGATCATATTATGGGGTCCAAGATTACCT
CTTGAGAGAATCCCTGACCAAGCGGGTGTGGTTTTCTCACTGGTCCCAAA
CCAATTGGGGGAAACGGAATGTGGCTGGGTCCCCACCAATTCCGGNACAA
GAGCCCAAGGAGGGAGGAGGCTGTGAACTTTAAGAAGGCGTCTTGGATCC
GGCCTTTCCCTAAAGAAACATCATGGCTATAGGGAAAGAAAGTAGAAAGG
C
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