EY659662

Overview
NameEY659662
Unique NameEY659662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.756e-15
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 2
Query:  347 FSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            FSFW NRN DEE  GE+V GG+DP+H++G+HTYVP
Sbjct:   67 FSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVP 101          

HSP 2 Score: 41.9726 bits (97), Expect = 2.756e-15
Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 3
Query:  450 PVTQK*YWQFDMADVMIDWPTTGFCAGGFPAIGDS 554
            PVT + YWQF + DV+I   +TGFCA G  A  DS
Sbjct:  101 PVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADS 135          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 2
Query:   44 CYFHSKYRSCRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEA--TREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTY 445
            C     Y S +S TY+K+G   +++Y +G +SGFFS+D V +G+L +   +FIE   T     T+  + FDGILGLG++++S+G   P+   + NQ  +   +F+F+      ++  G +  GG++   Y+G  TY
Sbjct:  176 CLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSL-PYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYL--PVHDKHTGFLTIGGIEERFYEGPLTY 308          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 2
Query:   56 SKYRSCRSSTYKKNGKSADIHYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPV-WYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            +KY   +SSTY+ +G++  I YG G + SG  ++D+V +G L++K Q  IE  +  + +F     DG+LGLGF  I+  + V     N+++QGL++ P+F  +  + A     GE + GG D   +KG  T VP
Sbjct:  124 TKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQT-IELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGK-ASNGGGGEYIFGGYDSTKFKGSLTTVP 255          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARP5_RHINI (Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 2
Query:   47 YFHSKYRSCRSSTYKKNGKSADIHYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            Y  +KY   +S TY K+G++  I YG G + SG    D V +G L ++ Q  IE  R  + +F     DG+LGLGF  I+   G   PV  N+++QGL++ PVF  +  + ++    GE + GG D   +KG  T +P
Sbjct:  121 YSQTKYNPNQSRTYAKDGRAWSISYGDGSSASGILGTDTVVLGGLTIQRQT-IELARREASSFQNGPSDGLLGLGFNSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFKGSLTTIP 255          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARP4_RHINI (Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   56 SKYRSCRSSTYKKNGKSADIHYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPV-WYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYV 448
            +KY   +SSTY K+G++  I YG G + SG   +D V +G L +K+Q  IE  +  + +F     DG+LGLGF  I+    V     N+++QGL++ PVF  +  + ++    GE + GG D   + G+ T +
Sbjct:  129 TKYDPSQSSTYAKDGRTWSISYGDGSSASGILGKDTVNLGGLKIKNQ-IIELAKREASSFSSGPSDGLLGLGFDSITTVSGVQTPMDNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFSGDLTTI 259          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARP3_RHINI (Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 2
Query:   56 SKYRSCRSSTYKKNGKSADIHYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            +KY    SSTY ++G++  I YG G + SG    D V +G L ++ Q  IE  R  +  F     DG+LGLGF  I+   G   PV  N+++QGL++ PVF  +  + ++    GE + GG D   +KG  T +P
Sbjct:  123 TKYNPNESSTYARDGRTWSISYGDGSSASGILGTDTVILGGLTIRHQT-IELARREASQFQSGPSDGLLGLGFDSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKESNGG-GGEYIFGGYDSSKFKGSLTTIP 254          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 42/139 (30.22%), Postives = 73/139 (52.52%), Query Frame = 2
Query:   35 SIACYFHSKYRSCRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            S AC  H  +    SST++ + ++  +   +G +SG    D V+IG    ++Q F  +  EP      A FDG+LGLG+  +++    PV+ N+  QG + EPVF+ + + N  +     ++ GG+D + + G   +VP
Sbjct:  109 SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLSTNTKKG--SVLMIGGVDNNFFTGNLKWVP 245          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: CARP2_RHINI (Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 2
Query:   56 SKYRSCRSSTYKKNGKSADIHYGTG-AISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISV--GKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            +KY   +SSTY K+G++  I YG G + SG    D V +G L +  Q  IE  +  + +F      G+LGLGF  I+   G   PV  N+++QGL+++P+F  +  + ++    GE + GG D   Y G  T +P
Sbjct:  123 TKYNPNQSSTYAKDGRTWSISYGDGSSASGILGTDTVTLGGLKITKQT-IELAKREATSFQSGPSYGLLGLGFDTITTVRGVKTPV-DNLISQGLISKPIFGVYLGKESNGG-GGEYIFGGYDSSKYSGSLTTIP 254          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 2
Query:   44 CYFHSKYRSCRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG-----DLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFW 358
            C   SK+ S  SST+ KNGKS  I YG+G  +G   +D V+ G      L V    F  A++  S  F     DGILGL F  ++V   VP   N +NQG++++P+FS W
Sbjct:  106 CKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIASKI-SADFKNDATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVW 214          
BLAST of EY659662 vs. ExPASy Swiss-Prot
Match: ASPR1_PHARH (Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.407e-11
Identity = 51/140 (36.43%), Postives = 68/140 (48.57%), Query Frame = 2
Query:   35 SIACYFHSKYRSCRSSTYKKNGKSADIHYGTGA-ISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPVFSFWFNRNADEE**GEIVSGGMDPDHYKGEHTYVP 451
            S AC  H KY    +ST KK   +  I YG G+  SG   +D+V    L    Q F   T E S +F     DGI GLG+  ++       +++++NQG V  PVFSF   R A      E+  GG++  HY G  TY P
Sbjct:  128 SAACNAHHKYTL--TSTGKKQSGTFSISYGDGSSASGPVYKDNVVASGLQATSQVFGAVTSESS-SFSSDPSDGISGLGWPALAQLSGTSYFWSLINQGTVTSPVFSF---RLATTN--SELYLGGINSAHYTGAITYTP 259          

HSP 2 Score: 21.9422 bits (45), Expect = 9.407e-11
Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 3
Query:  450 PVTQK*YWQFDMADVMID 503
            PVTQK YW   +  V ++
Sbjct:  259 PVTQKAYWTIALGGVSVN 276          
The following BLAST results are available for this feature:
BLAST of EY659662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
CARDE_CYNCA2.756e-1568.57Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PLM2_PLAFA6.268e-1533.82Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
CARP_RHICH1.069e-1435.82Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
CARP5_RHINI3.111e-1436.23Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2[more]
CARP4_RHINI9.051e-1434.59Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1[more]
CARP3_RHINI9.051e-1436.30Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1[more]
PAG1_PIG2.633e-1330.22Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
CARP2_RHINI1.307e-1234.81Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2[more]
ASP6_CAEEL2.912e-1240.00Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]
ASPR1_PHARH9.407e-1136.43Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659662 ID=EY659662; Name=EY659662; organism=Citrus sinensis; type=EST; length=877bp
CAAATTTGTGGGTGCCCTCTTCTAATGTTATTTCTCGATTGCATGCTATT
TCCATTCCAAGTACAGGTCATGCCGCTCAAGTACCTACAAGAAGAATGGT
AAATCGGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAG
TGAAGACCATGTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTA
TTGAGGCAACTAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGAT
GGCATACTTGGACTTGGCTTCCAAGAGATTTCTGTTGGAAAGGCTGTGCC
CGTGTGGTACAATATGGTAAATCAAGGCCTTGTCAATGAACCAGTTTTCT
CCTTTTGGTTTAACCGAAATGCTGATGAGGAATAATGAGGTGAAATTGTT
TCTGGTGGGATGGACCCTGACCATTACAAGGGTGAGCACACATATGTTCC
CTGTCACACAGAAATGATATTGGCAGTTTGATATGGCTGATGTCATGATT
GATTGGCCAACAACAGGATTTTGCGCTGGCGGCTTTCCCGCAATTGGTGA
TTCAGAACCTTTTTGTTGGTGGTCCTACGACCTGATAACTTAAGCAACCT
GCCATTGGGGCGCCTGTATTGCCACTTAATAATGACAGTCTTTTTTTGAC
AGTTTGAGAAGGGACATCTCCCAATGCTCTTGCCAAGAGTGAGACCTCAG
AATTGGCCCCAAATTGGGTGGGCCCCTTTCTTGGGCTCCCAGCTCGAGTT
GTGCCCTTAAAGTGCTACCTGGAAAAACACTCACCTGTGTGGGGCTCCGT
ACACGCGGGCCCTCTTTTAGCTCAACCTGGGTGGATGCTAATCCCTGTAA
GGCATCAAACCGCGCTCGTGTTATGTA
back to top