EY659647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CGM2_SCHPO (Cyclin mcs2 OS=Schizosaccharomyces pombe GN=mcs2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.587e-21 Identity = 61/175 (34.86%), Postives = 103/175 (58.86%), Query Frame = 3 Query: 102 PKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQ-DHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLK--DLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSN 617 P L +EEE + +Y +L + SA P I++TA+L+FKRFYL SVME+ PK I T ++ A K ++++S E+ K + + + +L YE V Q+L++DL V+ P+RPL+GF+ D CQ ++ + K + H+ +K + + + +D L P +AL A+ ++N Sbjct: 58 PPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLINSVMEYSPKIISFTSLFLATKCNDHYISIEQFCKNMPKTTPEEVLEYEFNVCQSLKWDLYVWLPFRPLQGFLLD----CQTVLPKVAVEKFYECHDLSKKFLIETLHSDIYFLHSPSIIALGAIYHTN 228
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNH_ECHMU (Probable cyclin-H OS=Echinococcus multilocularis GN=CYCH PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 3 Query: 96 SRPKPLNIEEEQSMRVFYENKLREVCSAFY---FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDH----QMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLK-------DLHETAKLE----VDKIMLTDAPLLFPPGQLALAAL 605 + P L EEE + Y ++E+ F P + A Y KRFYL SVM++ P+ +MLT +Y ACK + + + I ++ +++++ E+ + + L++D+ ++ PYRPL G + D+ + + + GE ++ D+ + K E + K TD L P Q ALA L Sbjct: 51 AEPTFLTAEEEFIIVKRYIFAMKELFHQFSDSGLPVDVFGFAATYLKRFYLNNSVMDYFPREMMLTALYLACKAADYPLGLQTFAAHIPRNREHYSEIVVHSELFLMEKLQYDIWIHTPYRPLSGLLVDLLAYRKTQLGEPMTIEAGEVATADMMTSLKKEGYEIIHKWFQTDLCLTHSPSQFALAVL 238
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_XENTR (Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 87 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAE-----------------ELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE V + K IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 210
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_XENLA (Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 87 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAE-----------------ELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE V + K IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 210
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_HUMAN (Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 87 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAE-----------------ELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE V + K IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 210
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_CHICK (Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 87 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAE-----------------ELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE V + K IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 210
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_BOVIN (Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12 Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 87 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAE-----------------ELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE V + K +L E + + ++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 210
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_RAT (Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 58/204 (28.43%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 81 NSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEE---------------------NHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALRNSNKVQR 629 + E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P + TCV+ A K+EE ++ S +E ++ IL E + + ++ LIVY PYRPL ++ DM G+ +L L A V+ TD LL+PP +ALA L + VQ+ Sbjct: 17 DKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASPKEFPYRMNH----ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDVLLPL---AWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQ 205
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: SSN8_GIBMO (RNA polymerase II holoenzyme cyclin-like subunit OS=Gibberella moniliformis GN=SSN8 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11 Identity = 42/171 (24.56%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 117 IEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEEN--HV------SAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAAL 605 + +++ + +++ +L + + ATA +Y KRFY + + +P ++ T +Y ACKIEE+ H+ + + G ++ D + E + + LIV+ PYR + N EL ++ D + A+ ++ +TD PLL+PP +A+ A+ Sbjct: 41 LPQQRRLYIYFNQQLIRLAKRLTIRQQSMATAQVYMKRFYSKVEIRRTNPYLVIATAIYLACKIEESPQHIRLIVTEARQMWGDLVAIDTSKLGECEFFMISEMRSQLIVFQPYRTITALRN-----------ELSLVDDEVQLARSVINDHFMTDLPLLYPPHIIAMVAI 200
BLAST of EY659647 vs. ExPASy Swiss-Prot
Match: CCNC_DROPS (Cyclin-C OS=Drosophila pseudoobscura pseudoobscura GN=CycC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11 Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 3 Query: 111 LNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQD-----------------HQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQLALAALR 608 LN +E Q + +F+ N ++ + ++ ATA +YFKRFY + S+ P + TC+ A K+EE V + I Q IL E + + L+ LIVY PYRPL + DM Q+ +++ D + TD LL+PP Q+A+A L+ Sbjct: 32 LNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYTQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVND-----------SLRTDVCLLYPPYQIAIACLQ 203 The following BLAST results are available for this feature:
BLAST of EY659647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659647 ID=EY659647; Name=EY659647; organism=Citrus sinensis; type=EST; length=904bpback to top |