EY659545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.046e-12 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 3 Query: 384 GEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSY-ALGLLMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHH 725 G P P + D+ ++PK +E +++ VL V AL IS W+ PL W GT FV+GHDC H SFS + L VG + ++ PY WR H HH Sbjct: 25 GAPPPFKIA--DIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRISHRTHH 137
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 44/147 (29.93%), Postives = 61/147 (41.50%), Query Frame = 3 Query: 447 FEIDDVKA------WKSVLLSVSSY---------ALGLLMISKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHHAKKTCLTEIQLGILFGKKSLTHLPFCAKQYILIWPLSTL 842 F+I D++A W L SY AL + + W+L PL W GT FV+GHDC H SFS LL +VG + ++ PY WR H HH + + + +K +LP + PL L Sbjct: 31 FKIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPML 177
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 40/118 (33.90%), Postives = 56/118 (47.46%), Query Frame = 3 Query: 384 GEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAP----WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHH 725 G P P N+ D+ ++PK + + WKS+ V A+ + + A W + PL W GT FV+GHDC H SFS + L +VG L ++ PY WR H HH Sbjct: 49 GAPPPFNLA--DIRAAIPKHCWVKNP---WKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHH 161
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 40/118 (33.90%), Postives = 56/118 (47.46%), Query Frame = 3 Query: 384 GEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAP----WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHH 725 G P P N+ D+ ++PK + + WKS+ V A+ + + A W + PL W GT FV+GHDC H SFS + L +VG L ++ PY WR H HH Sbjct: 91 GAPPPFNLA--DIRAAIPKHCWVKNP---WKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHH 203
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 393 LPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLA--------WAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHHAKKTCLTEIQL 758 LPE T+K++ + +P FE ++ V + ++ +L L ++ + PL W G TG +V+ H+C H+SFS +K L + VG + L+ PY WR H KHH +T+ Q+ Sbjct: 35 LPE-FTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLFLAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQV 163
BLAST of EY659545 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 393 LPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLA--------WAWTGTAVTGFFVIGHDCAHKSFSKNKLLGDIVGTLAFLPLIYPYEPWRFKHDKHHAKKTCLTEIQL 758 LPE T+K++ + +P FE ++ V + ++ +L L ++ + PL W G TG +V+ H+C H+SFS +K L + VG + L+ PY WR H KHH +T+ Q+ Sbjct: 35 LPE-FTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLFLAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQV 163 The following BLAST results are available for this feature:
BLAST of EY659545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659545 ID=EY659545; Name=EY659545; organism=Citrus sinensis; type=EST; length=929bpback to top |