EY659502

Overview
NameEY659502
Unique NameEY659502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5467 contig Csv1_Contig5467:18..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659502 vs. ExPASy Swiss-Prot
Match: YJ23_SCHPO (Uncharacterized protein C4B3.03c OS=Schizosaccharomyces pombe GN=SPCC4B3.03c PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12
Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 2 
Query:   53 LTDDATTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAILFMGHSRVPVYS-GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVV 409
            L  D  TII   L+L EK A+  MTPI   F+              I+  G+SR+PV+  G P + IG++L K L+  D  D  P+ K  +  +P+   +    D+LN  Q+G SH+ ++
Sbjct:  237 LNQDEVTIITAVLDLREKHAESIMTPIEDVFTLPMDRILDEDLIGEIICAGYSRIPVHKPGFPHDFIGMLLTKTLIGYDPDDKWPVGKFALATLPQTWPNTSCLDLLNYCQEGKSHMILI 356
The following BLAST results are available for this feature:
BLAST of EY659502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YJ23_SCHPO5.333e-1233.33Uncharacterized protein C4B3.03c OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659502 ID=EY659502; Name=EY659502; organism=Citrus sinensis; type=EST; length=917bp
CCGGNATTACAGACCCCGACCCACGCGTCCGNGAGCTGGTAATGGTGGGG
ATCTAACTGATGATGCGACTACTATCATCGCTGGAGCTCTGGAGTTGACT
GAAAAAACTGCAAAAGATGCCATGACTCCCATATCGAAGGCATTTTCTCT
TGATCTGGATGCAACACTTACTTTGGATACCTTAAATGCCATATTGTTCA
TGGGTCATAGTAGAGTTCCTGTTTACTCTGGGAATCCGACAAATATAATT
GGCCTCATTCTGGTTAAAAATCTTTTATCAGTCGATTATAGAGATGCAGT
TCCTTTGCGGAAAATGATCATACGGAGAATACCACGGGTTTCAGAAGACA
TGCCTTTGTATGATATTCTAAATGAATTTCAGAAAGGACATAGCCACATT
GCTGTTGTATATAAGGATCTAAATGAGAAAAAAGAGGGTGAGCTTTTTAA
GGACAATTGTAAGAAGCCAAGAGGACAACCTGAGAAATCATCTGAAAAAG
TTGATAATGGGGTTACTGCTGCTGGCCAGAATTTGCGGAATAAATTGGAA
TCAAAAGATGCTCAACAGACTAAGAAAGTTCCACCAGCTACTCCTACCTT
TAATAAGCGACACAGATGTTGNTCGTACTGCATTCTCGACATTGAGAATG
GTCCTTTTCCAGATTTTCCATCCAATGAGGAAGCCCGAGGTGTTATTACC
ATGGAGGATGTCTTTGAAGAACTTCTTCGGAAGAAATTCTGGGTGAAACC
CATGAATATGTCACCATTCACCACCGGATAAAAAGAAACATGCATGCCTT
CCAGGAAAGTCTCAAAATCCGGATAATACATCACAACCCTTTCTGAATGG
AAAATTTGCCTTTAAACATTTGCAGGCTAACCTTCCTTGGAGGACTTTGG
GCTCGAACCACTTTTCC
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