EY659499

Overview
NameEY659499
Unique NameEY659499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7556 contig Csv1_Contig7556:60..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 1
Query:  442 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYGGG------RYLEDFVS 735
            +T D+F++ VL   K VLV+F+A WCG C+ +AP+ E +AA +   D + +  L+ D+    A KYGV   PTL  +  G       G        R LEDF++
Sbjct:    8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG--DKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 109          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY659499 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  433 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFALEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGHKDGEEYG 705
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G     + G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
The following BLAST results are available for this feature:
BLAST of EY659499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
THIO_STRCO2.650e-1136.54Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=... [more]
THIO_SHIFL7.709e-1137.36Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV... [more]
THIO_SALTY7.709e-1137.36Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE... [more]
THIO_SALTI7.709e-1137.36Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=... [more]
THIO_ECOLI7.709e-1137.36Thioredoxin-1 OS=Escherichia coli (strain K12) GN=... [more]
THIO_ECOL67.709e-1137.36Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 ... [more]
THIO_ECO577.709e-1137.36Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659499 ID=EY659499; Name=EY659499; organism=Citrus sinensis; type=EST; length=922bp
ANAGATATTGAGAGGTATCAGATCTGGCTAGCTCTCAGCACTTTAACCTT
GTTCTTCGTATCAGCTCTAGCGGACGATGTCGTTGTGCTAACAGAAGACA
ACTTCGAGAAGGAGGTTGGTCAGGACAGGGGAGCTCTTGTTGAGTTTTAC
GCTCCTTGGTGTGGCCACTGTAAAAAGCTTGCTCCAGAGTATGAGAAACT
TGGTGCAAGCTTTAAGAAAGCAAAGTCTGTCTTGATTGGAAAGGTGGACT
GTGACGAGCATAAGAGCTTATGCAGCAAATATGGTGTTCAAGGATACCCA
ACAATTCAATGGTTTCCTAAAGGTTCTTTGGAACCCAAAAAGTATGAAGG
GCCACGATCTACTGAAGCCCTTGCTGAGTATGTGAATAATGAAGGAGGAA
CCAATGTGAAGATAGCTGCAGTCCCATCCAATGTGGTGGTACTAACAGCT
GATAATTTTGATGAGATAGTTTTGGACAAAAGCAAAGATGTTTTGGTTGA
ATTTTATGCACCATGGTGTGGCCATTGCAAAAACCTTGCGCCTACATATG
AAAAGGTGGCAGCCGCATTTGCATTGGAAGATGATGTAGTCGTTGCTAAT
TTGGATGCTGACAAATACAAGGATCTGGCTGAGAAGTATGGAGTTAGTGG
ATTTCCTACATTGAAGTTCTTTCCAAAAGGGCACAAAGATGGTGAGGAAT
ATGGGGGTGGCAGATATTTGGAAGACTTTGTTTCTTTCATCAATGAAAAA
TGTGGCACCAGTCGTGATGGAAAAGGACAACTTACTTCAACGGNGGTATA
GTTGCGAGCTTAAAGCCTNGGTGAAAGGATTTGTTGCTGCTACCGGTGAT
GAAAAAAGGCAGTCTTCTCAANATTGACCGGGAGTTTGAGTGCTTGAGGC
TCCACTGCGGCATGGGAAGATT
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