EY659457 | Citrus Genome Database

Overview


Name	EY659457
Unique Name	EY659457
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	952

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.369e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 135.576 bits (340), Expect = 4.118e-31
Identity = 68/75 (90.67%), Postives = 71/75 (94.67%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTI LEVE SDTI+NVKAKI DKE IPPDQQRLIFAG QL++GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 68.9366 bits (167), Expect = 4.734e-11
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTI L+ E  + I+NVK KIQDKEGIPPD++R  F    LE+G  L
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.084e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 130.568 bits (327), Expect = 1.325e-29
Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 127.872 bits (320), Expect = 8.587e-29
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTG TI LEVE SDTI+NVKAKI DKE IPPDQQRLIFA  QL++GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.566e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 118.242 bits (295), Expect = 6.804e-26
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    2 QIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 117.087 bits (292), Expect = 1.516e-25
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKE +P DQQRLI+AG QL+D +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.608e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 115.931 bits (289), Expect = 3.377e-25
Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    2 QIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 114.39 bits (285), Expect = 9.824e-25
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKE +P DQQRLIFAG QL+D +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.371e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3

Query:   57 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 245
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 120.553 bits (301), Expect = 1.371e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3

Query:  285 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 473
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 110.923 bits (276), Expect = 1.086e-23
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 3

Query:  513 TITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLR 701
            TITLEVE SDTI+NVKAKI DKE IPPDQQRLIFAG QL+DGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.270e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  258 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.5969 bits (244), Expect = 5.579e-20
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 91.6633 bits (226), Expect = 6.819e-18
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 3

Query:  486 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            I VKTLTGK I +++E +DTID VK ++ +KE IPP QQRLI+AG QL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.271e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  258 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.2117 bits (243), Expect = 7.286e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 3

Query:  486 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            I VKTLTGK I +++E +DTID +K ++ +KE IPP QQRLI+AG QL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.271e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  258 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.2117 bits (243), Expect = 7.286e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 3

Query:  486 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            I VKTLTGK I +++E +DTID +K ++ +KE IPP QQRLI+AG QL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.271e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  258 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.2117 bits (243), Expect = 7.286e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 3

Query:  486 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            I VKTLTGK I +++E +DTID +K ++ +KE IPP QQRLI+AG QL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.271e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 488
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 97.0561 bits (240), Expect = 1.623e-19
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 260
            I  KTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 3 Score: 92.0485 bits (227), Expect = 5.221e-18
Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGGMQI 716
            M I VKTLTGK I +++E +D +D +K ++ +KE IPP QQRLIF+G Q++D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

The following BLAST results are available for this feature:

BLAST of EY659457 vs. ExPASy Swiss-Prot

BLAST of EY659457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	3.369e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	1.084e-31	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	5.566e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	3.608e-27	76.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	1.371e-26	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	3.270e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	4.271e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	4.271e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	4.271e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	4.271e-20	58.23	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-009-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659457 ID=EY659457; Name=EY659457; organism=Citrus sinensis; type=EST; length=952bp
ATTCAAAGCCCGACCCACGCGTCCGGCAAATCTCTGNGAAAACTCTCACC
GGCAAGACAATCACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGT
AAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGC
TTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTAT
AATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGG
TATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGG
TGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAG
GAAGGGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCT
TGAGGATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCC
TCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACC
CTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGA
CAATGTCAAAGCCAAAATTCATGATAAGGAAAGGATCCCACCAGACCAGC
AAAGGCTCATCTTTGCCGGGTAACAACTAGATGATGGACGCACACTTGCA
GACTACAACATCCAGAAAGAATCAACCCTCCATTTGGTCCTTCGTCTCAG
GGGTGGCATGCAGATTTTTGTGAAACCCCTGACTGGTAAGACTATAACTT
TGAAGGGTGAAAGCTTTGAACCGATCGACAATGTCAAGGGCAAGATCCAG
GACAAGGAAGGCATCCCACCTGACAAAAGAAGGTAATCTTTTCCGGCAAA
CAACTTGGAAGATGGCGGACTTTTGGTGCTTCAACATCCAAAGGGAGCAA
ACCCTCCTTTGGGGCCTTCGCCCCGGGGGGGCTGCAAATTCTTGGAAAAC
CC