EY659457 | Citrus Genome Database

Overview


Name	EY659457
Unique Name	EY659457
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	952

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.623e-19
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

HSP 2 Score: 95.1301 bits (235), Expect = 6.168e-19
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

HSP 3 Score: 90.1225 bits (222), Expect = 1.984e-17
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I L++E +D ++ +K K+ +KE IPP QQRLIFAG Q++D +T ADY +   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.120e-19
Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 3

Query:  258 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 482
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

HSP 2 Score: 95.9005 bits (237), Expect = 3.616e-19
Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 254
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

HSP 3 Score: 88.9669 bits (219), Expect = 4.420e-17
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 3

Query:  486 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGGM 710
            I VKTLTGK I +++E +DTID +K ++ +KE IPP QQRLI+AG QL D +T  DY I+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.344e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 86.2705 bits (212), Expect = 2.865e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I +++E +D ++ +K ++ +KE IPP QQRLI++G Q++D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.344e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 86.2705 bits (212), Expect = 2.865e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I +++E +D ++ +K ++ +KE IPP QQRLI++G Q++D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.344e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 86.2705 bits (212), Expect = 2.865e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I +++E +D ++ +K ++ +KE IPP QQRLI++G Q++D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.344e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 86.2705 bits (212), Expect = 2.865e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I +++E +D ++ +K ++ +KE IPP QQRLI++G Q++D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.344e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            I  KTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 86.2705 bits (212), Expect = 2.865e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M I VKTLTGK I +++E +D ++ +K ++ +KE IPP QQRLI++G Q++D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.061e-18
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T  DY I+  S LHLVL LRGG
Sbjct:    1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

HSP 2 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            +  +TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T  DY I+  S LHLVL LRGG
Sbjct:    3 VKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

HSP 3 Score: 85.1149 bits (209), Expect = 6.383e-16
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            + + V+TLTGK I +++E +DT+D +K ++ ++E IPP QQRLI+ G QL D +T  DY I+  S LHLVL LRGG
Sbjct:    1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.984e-17
Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP  QR+++ GKQL D  T   YN+++ S LHLVL LRGG
Sbjct:    1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

HSP 2 Score: 87.4261 bits (215), Expect = 1.286e-16
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            +I  KTLT K I +E+E +DTI+ +K +I++KEGIPP  QR+++ GKQL D  T   YN+++ S LHLVL LRGG
Sbjct:    2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

HSP 3 Score: 82.4185 bits (202), Expect = 4.137e-15
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            M+I VKTLT K I +E+E +DTI+ +K +I +KE IPP  QR+++ G QL D  T   YN+++ S LHLVL LRGG
Sbjct:    1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.591e-17
Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 482
            M I VKTLTGK I ++++ +D I  +K ++++KEGIPP QQRLIF GKQ+ D +  ++Y+I+  S LHLVL LRGG+
Sbjct:    1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

HSP 2 Score: 87.8113 bits (216), Expect = 9.847e-17
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 3

Query:   30 ISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 254
            I  KTLTGK I ++++ +D I  +K ++++KEGIPP QQRLIF GKQ+ D +  ++Y+I+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

HSP 3 Score: 82.8037 bits (203), Expect = 3.168e-15
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGGM 710
            M I VKTLTGK I ++++ +D I  +K ++ +KE IPP QQRLIF G Q+ D +  ++Y+I+  S LHLVL LRGG+
Sbjct:    1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

The following BLAST results are available for this feature:

BLAST of EY659457 vs. ExPASy Swiss-Prot

BLAST of EY659457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
NEDD8_CAEEL	1.623e-19	60.53	NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1	[more]
RUB2_ARATH	2.120e-19	61.33	NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN...	[more]
NEDD8_RAT	2.344e-18	56.58	NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1	[more]
NEDD8_RABIT	2.344e-18	56.58	NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1	[more]
NEDD8_MOUSE	2.344e-18	56.58	NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2	[more]
NEDD8_HUMAN	2.344e-18	56.58	NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1	[more]
NEDD8_BOVIN	2.344e-18	56.58	NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1	[more]
RUB3_ORYSJ	3.061e-18	53.95	NEDD8-like protein RUB3 OS=Oryza sativa subsp. jap...	[more]
RUB3_ARATH	1.984e-17	55.26	NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DICDI	2.591e-17	53.25	NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-009-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659457 ID=EY659457; Name=EY659457; organism=Citrus sinensis; type=EST; length=952bp
ATTCAAAGCCCGACCCACGCGTCCGGCAAATCTCTGNGAAAACTCTCACC
GGCAAGACAATCACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGT
AAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGC
TTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTAT
AATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGG
TATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGG
TGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAG
GAAGGGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCT
TGAGGATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCC
TCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACC
CTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGA
CAATGTCAAAGCCAAAATTCATGATAAGGAAAGGATCCCACCAGACCAGC
AAAGGCTCATCTTTGCCGGGTAACAACTAGATGATGGACGCACACTTGCA
GACTACAACATCCAGAAAGAATCAACCCTCCATTTGGTCCTTCGTCTCAG
GGGTGGCATGCAGATTTTTGTGAAACCCCTGACTGGTAAGACTATAACTT
TGAAGGGTGAAAGCTTTGAACCGATCGACAATGTCAAGGGCAAGATCCAG
GACAAGGAAGGCATCCCACCTGACAAAAGAAGGTAATCTTTTCCGGCAAA
CAACTTGGAAGATGGCGGACTTTTGGTGCTTCAACATCCAAAGGGAGCAA
ACCCTCCTTTGGGGCCTTCGCCCCGGGGGGGCTGCAAATTCTTGGAAAAC
CC