EY659449

Overview
NameEY659449
Unique NameEY659449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7481 contig Csv1_Contig7481:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_CHLPN (Ribulose-phosphate 3-epimerase OS=Chlamydia pneumoniae GN=rpe PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.235e-34
Identity = 83/212 (39.15%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   50 KSDIIVSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNP--WIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYA 679
            +  ++V PSI+ A+   L  + K +E AG D+IH+D+MDG FVPN+T GP ++ A+   TDL L+VH MI  P + +  F+++GAD + VH E S  I     L+ IK  G +AG+  +P TS+  +   L   D+V++MSV PGF GQSF+ + ++KI+  R      G+     IEVDGG+  ++A    +AG   L   S +F A   A
Sbjct:    4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDI--KELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGIDQQSAPLCRDAGADILVTASYLFEADSLA 213          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 86/227 (37.89%), Postives = 124/227 (54.63%), Query Frame = 2
Query:   62 IVSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGIK 700
            I++PSIL+++FA L  +   V  AG DW+H+DVMDG FVPNIT+G  +V +LR     P              D H+M+  PE+ V DF K GAD  + H E +   +HL   +  IKS G KA   + P TS+  +  +   +D+ L+M+V PGFGGQ F+E  + K+  LR           I+VDGG+G +      +AG   + AG++VF A D  + I  +K
Sbjct:    5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLN----IQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMK 224          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe GN=SPAC31G5.05c PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32
Identity = 81/217 (37.33%), Postives = 122/217 (56.22%), Query Frame = 2
Query:   65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGIKTS 706
            ++PS+L+ +FA L ++V  +   G DW+HVDVMD +FVPN+TIGP+VV A+R      +   D HLM++EPE+ +     AGA +   H E  +T      +++    G   G  L P T +  I   ++ +D+VL+M+V PG GGQSF+   + K+  LR+      V    EVDGG+  K      +AG   + AG+AVF A+   E I G++ S
Sbjct:    6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKTPVEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTLNV----EVDGGLSLKTVDAAADAGANVIVAGTAVFHAQSPEEVISGLRNS 216          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii GN=RPE1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.670e-31
Identity = 83/224 (37.05%), Postives = 126/224 (56.25%), Query Frame = 2
Query:   62 IVSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--------TDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGIK 700
            I++PSIL+++FA L      V  AG +W+H+DVMDG FVPNIT+GP +V +LR          +D P    D H+M+ EPE+ V  F++ GAD  + H E  +T +    +  IKS G +A   + P T +  +  +   +D+ L+M+V PGFGGQ F+   + K++ LR    E      I+VDGG+G +      +AG   + AG++VF A D  + I  +K
Sbjct:    5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVAALR----EKFPQLDIQVDGGLGKETIPHAAKAGANVIVAGTSVFAAADQKDVISYMK 222          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata GN=RPE1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.113e-30
Identity = 84/243 (34.57%), Postives = 128/243 (52.67%), Query Frame = 2
Query:   62 IVSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP----------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGIKTSKGXKQLQCEQMI 742
            I++PSIL+++FA L  +   V  +G +W+H+DVMDG FVPNIT+G  +V +LR                       D H+M+ EPE+ V DF KAGAD  + H E  +T      +  IK  G KA   + P T +  +  +   +D+ L+M+V PGFGGQ F+   + K+  LR           I+VDGG+G +      +AG   + AG++VF A D  E I  +K  +  K+L+ + ++
Sbjct:    5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVEALRTKFPHMN----IQVDGGLGKETIGVAAKAGANVIVAGTSVFTASDPHEVISFMK-EEVRKELKAKHIL 240          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_PONAB (Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=RPE PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29
Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 2
Query:   65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKD 673
            + PSIL+++ A L  +   +  +G D++H+DVMDG FVPNIT G  VV++LR     D   D+H+M+ +PEQ V     AGA+  + H E  +T +    +  I+  G K G+ + P TS+  +    + +D+ L+M+V PGFGGQ F+E  + K+  LR           IEVDGGVGP       EAG   + +GSA+  ++D
Sbjct:    7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSED 205          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_HUMAN (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29
Identity = 77/205 (37.56%), Postives = 116/205 (56.59%), Query Frame = 2
Query:   65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKD 673
            + PSIL+++ A L  +   +  +G D++H+DVMDG FVPNIT G  VV++LR     D   D+H+M+ +PEQ V     AGA+  + H E  +T +    +  I+  G K G+ + P TS+  +    + +D+ L+M+V PGFGGQ F+E  + K+  LR           IEVDGGVGP       EAG   + +GSA+  ++D
Sbjct:    7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSED 205          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: ALSE_ECOLI (D-allulose-6-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=alsE PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28
Identity = 66/208 (31.73%), Postives = 115/208 (55.29%), Query Frame = 2
Query:   65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAI 688
            +SPS++  +  K  EQ++ ++ +  D+ H+D+MDG FVPN+T+ P  V  ++ +   PLD HLM+  P+  +    +AGAD +++H E  +     R + +I+    K G++LNP T + A++  +   D + +M+V+PGF GQ FI   + K+++L+      G+   IEVDG          + AG      G++  G  ++AE I
Sbjct:    3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTS--GLFNHAENI 206          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_MOUSE (Ribulose-phosphate 3-epimerase OS=Mus musculus GN=Rpe PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.849e-28
Identity = 77/207 (37.20%), Postives = 116/207 (56.04%), Query Frame = 2
Query:   65 VSPSILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRM--CLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKD 673
            + PSIL+++ A L  +   +  +G D++H+DVMDG FVPNIT G  VV++LR     D   D+H+M+  PEQ V     AGA+  + H E  +T +    +  I+  G K G+ + P T++  +    + +D+ L+M+V PGFGGQ F+E  + K+  LR     L+      IEVDGGVGP       EAG   + +GSA+  + D
Sbjct:    7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLD------IEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDD 205          
BLAST of EY659449 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.572e-19
Identity = 68/208 (32.69%), Postives = 100/208 (48.08%), Query Frame = 2
Query:   74 SILSANFAKLVEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLTQIKSLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCLENGVNPWIEVDGGVGPKNAX*XIEAGRYALGAGSAVFGAKDYAEAIKGI 697
            SIL  NF  L E++  ++  G   IH+DVMD  FV NIT GP +++ +    D   DVH+M+  P   +         +V++H E      +   L +   L    G+ LNP T +   E  +   D VLIMSV PGFGGQ F E  + K+ ++RR          + +DGG+   N    I    YA+  GS  F + D  + ++ I
Sbjct:   13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL---FGIALNPETQVDDAE--MRSADFVLIMSVKPGFGGQKFQEECLAKVEEVRR------YGKMVGIDGGIEMSNIG-RITGADYAV-VGSGYFRSGDRKKFLRDI 206          
The following BLAST results are available for this feature:
BLAST of EY659449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RPE_CHLPN1.235e-3439.15Ribulose-phosphate 3-epimerase OS=Chlamydia pneumo... [more]
RPE_YEAST1.156e-3237.89Ribulose-phosphate 3-epimerase OS=Saccharomyces ce... [more]
RPE_SCHPO4.394e-3237.33Ribulose-phosphate 3-epimerase OS=Schizosaccharomy... [more]
RPE_ASHGO1.670e-3137.05Ribulose-phosphate 3-epimerase OS=Ashbya gossypii ... [more]
RPE_CANGA4.113e-3034.57Ribulose-phosphate 3-epimerase OS=Candida glabrata... [more]
RPE_PONAB5.939e-2937.56Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=... [more]
RPE_HUMAN5.939e-2937.56Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=... [more]
ALSE_ECOLI2.947e-2831.73D-allulose-6-phosphate 3-epimerase OS=Escherichia ... [more]
RPE_MOUSE3.849e-2837.20Ribulose-phosphate 3-epimerase OS=Mus musculus GN=... [more]
RPE_ENCCU5.572e-1932.69Ribulose-phosphate 3-epimerase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659449 ID=EY659449; Name=EY659449; organism=Citrus sinensis; type=EST; length=888bp
GAGAATTTTTACTATAGTGAAGGCATCAGCTCGCGCGGATAAGTTCTCGA
AAAGTGATATTATTGTTTCTCCATCTATTCTCTCTGCTAATTTCGCGAAG
TTAGTCGAGCAGGTAAAAGCAGTGGAATTGGCTGGTTGTGATTGGATTCA
TGTTGATGTCATGGATGGTCGTTTTGTTCCAAACATTACAATTGGACCTC
TTGTGGTTGATGCTTTGCGCCCTGTGACAGACCTTCCTTTGGATGTTCAT
TTGATGATTGTCGAACCTGAACAACGAGTGCCTGATTTTATCAAGGCTGG
AGCTGACATAGTCAGCGTCCACTGTGAGCAATCATCCACTATTCATTTGC
ACCGCACTCTTACCCAAATAAAAAGTTTGGGAGCTAAAGCTGGAGTTGTC
CTCAACCCTGCTACCTCACTGAGTGCAATAGAATGTGTCCTTGATGTGGT
TGATCTTGTCTTGATCATGTCGGTGAACCCTGGCTTTGGTGGGCAAAGCT
TTATTGAGAGCCAAGTAAAAAAAATCTCAGACTTGAGAAGAATGTGTTTA
GAGAATGGAGTAAACCCATGGATTGAAGTAGATGGTGGAGTAGGTCCGAA
AAATGCATANTAGGNTATTGAAGCTGGGCGCTATGCCTTGGGTGCTGGTT
CAGCTGTCTTTGGAGCTAAAGATTATGCTGAAGCTATAAAGGGAATAAAA
ACCAGCAAAGGCCANAAGCAGTTGCAGTGTGAACAGATGATTACAAAAGG
ACTGATTAGATTCATTCTGCAGTATCTGTATCACCCACCTATGCCCAGTA
ATTANTCGCCTATTGCTTGGTCATGTCGTTGGCAGAATCATCTCCCTTCT
GGGGCGGTCCCTGTTGTTGGGGAGGTACTATAAAAATC
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