EY659444

Overview
NameEY659444
Unique NameEY659444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11032 contig Csv1_Contig11032:347..1263. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 60/216 (27.78%), Postives = 97/216 (44.91%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPE-PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYH--RTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLK-----------VESAIKNGSFADILDKSITDWP--LAETEELACIALKCSNLKCRDRPDLDTEVMPVLRKLKD 602
            V E++   SL  ++ H N    L W  R +II  VA GL++L +  P   I H  +K  NI+LD ++   + D  L  ++S       +E+    +     Y  PEY   +   I  K+D++ FGV+IL++LT   P   L +           V   +K     D+ DK +       AE   L  I L+C   +   R D+  EV+ ++  L++
Sbjct:  447 VTEFMPNSSLASHL-HANNSAGLDWITRLKIIKGVAKGLSYLFDELPTLTIPHGHMKSSNIVLDDSFEPLLTDYALRPMMS-------SEHAHNFMTA---YKSPEYRPSKGQIITKKTDVWCFGVLILEVLTGRFPENYLTQGYDSNMSLVTWVNDMVKEKKTGDVFDKEMKGKKNCKAEMINLLKIGLRCCEEEEERRMDM-REVVEMVEMLRE 650          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 404
            VYEY   GSL  +++  +   KP L W  R +I    A  + +LH +   P+VH+++K  NILLD     ++ D GLA             +  T     + Y  PE         KSD+Y+FGV++L+LLT   P
Sbjct:  489 VYEYFTSGSLHRFLHLSDDFSKP-LTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANF-----------HHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKP 612          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 3
Query:    9 EYLXKGSLGDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILA-GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 392
            EY+ +GSL   ++ Q  +  L W +  +++ + A G+ +LHNS P  I+HRDLK  N+L+D N+  K+ D GL+          I +   T+ A GT  +  PE  R+     K+D+Y+FG+I+ +  T
Sbjct:  449 EYMPRGSLYSILHDQALQ--LQWSLLIKMMIDAAKGVIYLHNSTPV-ILHRDLKSHNLLVDENWKVKVADFGLS---------TIEQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECAT 565          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 46/135 (34.07%), Postives = 65/135 (48.15%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIY-HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 404
            VYE+   GSL D+++  +    AL W  R +I    A  L +LH      IV +++K  NILLD      + D GLA  +  A         E +      Y  PE   +G    KSD+Y+FGV++L+LLT   P
Sbjct:  490 VYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTA--------NELLNQTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKP 616          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: RIPK1_MOUSE (Receptor-interacting serine/threonine-protein kinase 1 OS=Mus musculus GN=Ripk1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLIS--------DAIPDNITEYRETILAGTLHYMDPEYHRTGTIRP--KSDLYAFGVIILQLLTSCLPNGVLLKVES---AIKNGS 449
            V EY+ KG+L   +  Q     +P  ++ +II E   G+ +LH+   + ++H+DLKP NIL+DR++  KI D+G+A   +        D     ++   +    GTL+YM PE+      +P  KSD+Y+FG+++  +     P   ++  E     IK+G+
Sbjct:   91 VMEYMEKGNLMHVLKTQID---VPLSLKGRIIVEAIEGMCYLHD---KGVIHKDLKPENILVDRDFHIKIADLGVASFKTWSKLTKEKDNKQKEVSSTTKKNNGGTLYYMAPEHLNDINAKPTEKSDVYSFGIVLWAIFAKKEPYENVICTEQFVICIKSGN 246          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPEPIV-HRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIK---NGSFADILDKSITDWPLAETE-------ELACIALKCSNLKCRDRPDLDTEV 575
            V ++  +GSL   ++     GKP+L W  R +I+  VA GL +LH   P  +  H  LK  N+LL + +   + D GL  LI+        E  +  +A    Y  PEY +   I  K+D++  G++IL++LT   P       E  +    N  F  +   S+ D  + +T        +L  I L C       R D+   V
Sbjct:  429 VCDFAERGSLAINLHSNQSLGKPSLDWPTRLKIVKGVAKGLFYLHQDLPSLMAPHGHLKSSNVLLTKTFEPLLTDYGLIPLINQ-------EKAQMHMAA---YRSPEYLQHRRITKKTDVWGLGILILEILTGKFPANFSQSSEEDLASWVNSGFHGVWAPSLFDKGMGKTSHCEGQILKLLTIGLNCCEPDVEKRLDIGQAV 622          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: PKNB_LACLA (Probable serine/threonine-protein kinase pknB OS=Lactococcus lactis subsp. lactis GN=pknB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 3
Query:    3 VYEYLXKGSLGDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 404
            V E++   +L  YI   N    L      +II E+   +   H+     I+HRDLKP N+L+  +   K+ D G+AK +S+    ++T+     + G++HY+ PE  R      +SD+YA G+I+ +LLT  +P
Sbjct:   89 VMEFVDGMTLKQYI---NQNAPLANDEAIEIITEILSAMDMAHS---HGIIHRDLKPQNVLVSSSGTVKVTDFGIAKALSET---SLTQ--TNTMFGSVHYLSPEQARGSNATVQSDIYAIGIILFELLTGQIP 211          
BLAST of EY659444 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 3
Query:    9 EYLXKGSLGDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILA-GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 392
            EY+ +GSL  Y    N K  + W +  +++ + A G+ +LH S P  I+HRDLK  N+L+D N+  K+ D GL+          I +   T+ A GT  +  PE  R+     K+D+Y+FG+I+ +  T
Sbjct:  466 EYMPRGSL--YSILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTPV-ILHRDLKSHNLLVDENWKVKVADFGLS---------TIEQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECAT 582          
The following BLAST results are available for this feature:
BLAST of EY659444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 278
Match NameE-valueIdentityDescription
Y1061_ARATH2.647e-1127.78Probably inactive leucine-rich repeat receptor-lik... [more]
SRF4_ARATH2.647e-1133.09Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
DRKA_DICDI2.647e-1134.11Probable serine/threonine-protein kinase drkA OS=D... [more]
SRF6_ARATH4.515e-1134.07Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
RIPK1_MOUSE4.515e-1130.25Receptor-interacting serine/threonine-protein kina... [more]
RLK_ARATH7.701e-1127.94Probable LRR receptor-like serine/threonine-protei... [more]
PKNB_LACLA7.701e-1132.09Probable serine/threonine-protein kinase pknB OS=L... [more]
DRKB_DICDI7.701e-1134.11Probable serine/threonine-protein kinase drkB OS=D... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659444 ID=EY659444; Name=EY659444; organism=Citrus sinensis; type=EST; length=917bp
TGGTTTATGAATACCTGGNAAAAGGAAGCCTCGGAGACTATATTTACCAT
CAGAATGGGAAGCCTGCTCTTCCTTGGTTTGTTCGGTTCCAGATAATTTT
TGAAGTAGCCTGTGGACTTGCATTCTTACACAACTCAAAGCCAGAGCCTA
TTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTAT
GTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCAT
ACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTTC
ATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATCT
GATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCCT
TCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCCT
TTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAACA
GAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAAATGCAGGGA
TAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGG
ATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGNCATGTTTATGCACCA
AGCCACTTCTTCTGTCCAATCCTTCAGGAAGTCATGGAAGATCCATACAT
TGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGGCATGGCTTT
GAGAAACACATGTATCTCCAGTGACAAAGCTTAGGCTTCAGCATTTGTCA
ATTATTTCAACTACACACTGCNGTCTGNCATTCAGCAATGGGAGTCACCT
GTGACATCTCTGTAAAGATAGTTGAATGGGTCCCCTTTTATTNCTTGNAT
CCTTCATGCCTATCAGA
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