EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.920e-60
Identity = 113/246 (45.93%), Postives = 161/246 (65.45%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +T  GH++Y LG I+KR + ++E+E+ +  K SF YAWVLD+   ERERG+T+D+ + KFETT    T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG    GQTREH LL  +LGV Q+    NKMD     + + R+ EI  ++  +LK+ G+    V F+P SG  G+N+I RS + +   WYKG  LL+ +D+   P+R  DKP RL + DV+K  G G    G++E G ++ G
Sbjct:  274 STLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTG 517          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.497e-60
Identity = 112/246 (45.53%), Postives = 160/246 (65.04%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +T  GHL+Y LG ++KR + ++E+E+ +  K SF YAWVLD+   ERERG+T+D+ + KFET     T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG    GQTREH LL  +LGV Q+    NKMD     + + R+ EI  ++  +LK+ G+    V F+P SG  G+N+I RS + +   WYKG  LL+ +D+   P+R  DKP RL + DV+K  G G    G++E G ++ G
Sbjct:  276 STLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTG 519          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.953e-58
Identity = 116/252 (46.03%), Postives = 160/252 (63.49%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +TT G L Y LG I +  +E+  +EA +  K  F +A+++D+ K ER RG+TIDIA  + ET   Y T++DAPGH+DF+KNMITG SQAD AVL++ +  G  E       QT+EHA+LA T G+ Q+I   NKMD     Y + R++E+  +V   LK +GY  E  +  +P + F GDN++++S  + WY GPTL +ALD +  P+ P D PLR+P+Q    I GIGTV  GRVETG LKPG  +   PS
Sbjct:   21 STTVGRLKYDLGLIPESELEKIREEAKKYGKEEFVFAYLMDRQKEERARGVTIDIAHTELETPHNYITIVDAPGHKDFVKNMITGASQADAAVLVVAADDGVQE-------QTQEHAVLARTFGINQIIVYINKMDKV--NYDQKRFEEVKNQVLKLLKMIGYKDENIIAVIPGASFHGDNVVKKSDKMPWYNGPTLYEALDMLKPPQLPVDLPLRIPIQSALSIKGIGTVLTGRVETGKLKPGDKIIVLPS 263          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.721e-56
Identity = 110/252 (43.65%), Postives = 161/252 (63.89%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G ++Y  G +DKR +E++E+EA E N+ ++  +W LD  + ER++G T+++    FET K + T++DAPGH+ F+ NMI G SQAD AVL+I +  G FE G  K GQTREHA+LA T GVK +I   NKMD  T  +S  RY+E  +++  +LKKVG+NP+K + F+P SG  G N+ E+S    WY G   +  LDN+    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P+
Sbjct:   88 STIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPN 337          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.721e-56
Identity = 110/252 (43.65%), Postives = 161/252 (63.89%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G ++Y  G +DKR +E++E+EA E N+ ++  +W LD  + ER++G T+++    FET K + T++DAPGH+ F+ NMI G SQAD AVL+I +  G FE G  K GQTREHA+LA T GVK +I   NKMD  T  +S  RY+E  +++  +LKKVG+NP+K + F+P SG  G N+ E+S    WY G   +  LDN+    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P+
Sbjct:   88 STIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPN 337          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.084e-54
Identity = 107/252 (42.46%), Postives = 161/252 (63.89%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G +++  G +DKR +E++E+EA E N+ ++  +W LD  + ER++G T+++    FET + + T++DAPGH+ F+ NMI G SQAD AVL+I +  G FE G  K GQTREHA+LA T GVK +I   NKMD  T  +S  RY+E  +++  +LKKVG++P+K + F+P SG  G N+ E+S    WY G   +  LDN+    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P+
Sbjct:  217 STIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANVKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 466          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.084e-54
Identity = 107/252 (42.46%), Postives = 161/252 (63.89%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G +++  G +DKR +E++E+EA E N+ ++  +W LD  + ER++G T+++    FET + + T++DAPGH+ F+ NMI G SQAD AVL+I +  G FE G  K GQTREHA+LA T GVK +I   NKMD  T  +S  RY+E  +++  +LKKVG++P+K + F+P SG  G N+ E+S    WY G   +  LDN+    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P+
Sbjct:  217 STIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 466          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.188e-53
Identity = 106/252 (42.06%), Postives = 161/252 (63.89%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G +++  G +D+R +E++E+EA E N+ ++  +W LD  + ER++G T+++    FET K + T++DAPGH+ F+ NMI G SQAD AVL+I +  G FE G  K GQTREHA+LA T GVK +I   NKMD  T  +S  RY+E  +++  +LKKVG++P+K + F+P SG  G N+ E+S    WY G   +  LD++    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P+
Sbjct:  221 STIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 470          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4)

HSP 1 Score: 206.838 bits (525), Expect = 1.314e-52
Identity = 111/249 (44.58%), Postives = 156/249 (62.65%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTN--LDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 763
            +T  G ++++LG I+ R +++   EAA   K SF YAW+LD  + ER RG+T+D+A   FE+ K    + DAPGHRDFI  MI G S AD AVL++DS+   FE G  ++GQTREHA L   LG+ +++   NK+D  +  +S+ R+ EI   VS +L K VG+    V FVPIS   G N+I++ ++    WYKGPTLL ALD +  P++P  KPLRL + DVY+     TV  GRVE G ++   V+
Sbjct:  191 STMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKGPTLLSALDQLVPPEKPYRKPLRLSIDDVYRSPRSVTV-TGRVEAGNVQVNQVL 436          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.716e-52
Identity = 106/254 (41.73%), Postives = 155/254 (61.02%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN-PEKVPFVPISGFEGDNMIER--STNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 778
            +T  G+L+Y  G +DKR IE++E+EA +  ++ +  +WV+D  K ER  G TI++    FET K   T++DAPGH+ ++  MI G SQAD  VL+I +  G +E G  + GQTREHALLA T GV +M+   NKMD  T  +SK RYD+ V  VS++L+ +GYN    V F+P+SG+ G N+ +        WY GPTLL+ LD +N   R  + P  LP+    K+  +GT+  G++E+G +K G      P+
Sbjct:  274 STMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGFERGGQTREHALLAKTQGVNKMVVVVNKMDDPTVNWSKERYDQCVSNVSNFLRAIGYNIKTDVVFMPVSGYSGANLKDHVDPKECPWYTGPTLLEYLDTMNHVDRHINAPFMLPI--AAKMKDLGTIVEGKIESGHIKKGQSTLLMPN 525          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HBS1L_HUMAN2.920e-6045.93HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV... [more]
HBS1L_BOVIN8.497e-6045.53HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1[more]
EF1A_NANEQ7.953e-5846.03Elongation factor 1-alpha OS=Nanoarchaeum equitans... [more]
ERF3A_MOUSE9.721e-5643.65Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3A_HUMAN9.721e-5643.65Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_PONAB4.084e-5442.46Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_HUMAN4.084e-5442.46Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_MOUSE1.188e-5342.06Eukaryotic peptide chain release factor GTP-bindin... [more]
HBS1_SCHPO1.314e-5244.58Elongation factor 1 alpha-like protein OS=Schizosa... [more]
ERF3_YEAST1.716e-5241.73Eukaryotic peptide chain release factor GTP-bindin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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