EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LACS1 (Elongation factor Tu OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 89/253 (35.18%), Postives = 129/253 (50.99%), Query Frame = 2
Query:   20 VNATTTGHLIYK----LGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +        I K + E+   EA++       YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV+ ++   NK D           D +  EV   L +  +  + +P +    +   EGD   E            L+D +D  I  P+RP+DKP  +P++DV+ I G GTV  GR++ G +K G
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLAEKGLAEASD-------YASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKCDLVD---DDELLDLVEMEVRDLLSEYDFPGDDIPVIRGSALKALEGDKDAEAQI-------MELMDTVDEYIPTPQRPTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CORJK (Elongation factor Tu OS=Corynebacterium jeikeium (strain K411) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 87/243 (35.80%), Postives = 131/243 (53.91%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +        + +    +  E NK SF +   +DK   E+ERGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  ++ E+ P V IS  +     E+  N    +   L+ A D +I +P+R +DKP  +P++D++ I G GTV  GRVE G+L
Sbjct:   13 VNIGTIGHVDHGKTTTTAAITKVLADKFPEANK-SFAFD-AIDKAPEEKERGITINISHVEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEELLELVEMEVRELLAEQDFD-EEAPVVHISALKALEGDEKWAN----QILELMQACDESIPDPERETDKPFLMPVEDIFTITGRGTVVTGRVERGIL 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 89/248 (35.89%), Postives = 131/248 (52.82%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     KE     K S      +DK   E+ERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D    +       E+V+ EV   L + G+  + VP +  S  +   +IE   + +  K    L++A+D  I  P+RP DKP  +P++DV+ I G GTV  GRVE+GVLK G
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITMVLAKEG----KASATKYDEIDKAPEEKERGITINTAHVEYETEVRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKSD----QVDDPELIELVEMEVRELLSEYGFPGDDVPIIVGSALK---VIENPEDAEATKCIYELMEAVDTYIPTPERPVDKPFLMPIEDVFTITGRGTVATGRVESGVLKIG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPB (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain BS1) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 86/247 (34.82%), Postives = 125/247 (50.61%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     K A     R F     +DK   ERERGITI  A  +++T K +   ID PGH D+IKNMITG +Q D A+L++  T G          QTREH LLA  + V  ++   NK+D   P+      + +  E+   L +  +  + +P +    +   EGD   E++          L+DA+D+ I EP R  DKP  +P++DV+ I G GTV  GR+E GV+K
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITSVLAK-AGNAEMREFGD---IDKAPEERERGITISTAHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVELELRELLTEYDFPGDDIPIIKGSALKALEGDAEAEKAI-------MELMDAVDDYIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGVVK 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_BARHE (Elongation factor Tu OS=Bartonella henselae GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + + F +         FK    +D    ER RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D    +   A   E+V+ EV   L K  +  + +P V  S        ++S   D  +   L+  +DN I  P+RP D+P  +P++DV+ I G GTV  GRVE GV+K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAITKYFGE---------FKAYDQIDAAPEERARGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEVRELLSKYDFPGDDIPIVKGSALAALEDKDKSIGEDAVR--LLMSEVDNYIPTPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGVIKVG 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU1_ORITB (Elongation factor Tu 1 OS=Orientia tsutsugamushi (strain Boryong) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 80/206 (38.83%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    ER RGITI  A  +F + K +  ++D PGH D+IKNMITG SQ D  +L++    G          QTREH LLA  +GV  +I C NK+D   P+      + I  EV   L K  +  + VP +  S  +  N      + D  KG   L+DA+D+ I +P R  D+P  +P++DV+ I G GTV  GR+E GV+K G
Sbjct:   51 IDSAPEERARGITIQTAHVEFISKKRHYALVDCPGHVDYIKNMITGASQTDGLILVVSGVDGVMP-------QTREHVLLAKQVGVPSIIVCINKIDQADPEL----LELIEMEVRELLTKYDFPGDTVPIIRCSALKAIN-----GDSDAKKGILELMDAIDDYIPQPTRVLDQPFLMPIEDVFSILGRGTVVTGRIERGVIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSNC_PSEAE (Bifunctional enzyme cysN/cysC OS=Pseudomonas aeruginosa GN=cysNC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28
Identity = 69/216 (31.94%), Postives = 116/216 (53.70%), Query Frame = 2
Query:  134 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG++ ++   NKMD     + +  +++I  +  ++ +K+G     + FVP+S  +GDN++ +S    WY G +L++ L+ +      +   +R P+Q V +         G + +GV++ G  V   PSG
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARYG-------VQTQTRRHSFIASLLGIRHIVVAINKMD--LKDFDQGVFEQIKADYLAFAEKIGLKTSSLHFVPMSALKGDNVVNKSERSPWYAGQSLMEILETVEIAADRNLDDMRFPVQYVNRPNLNFRGFAGTLASGVVRKGDEVVALPSG 282          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_UREU1 (Elongation factor Tu OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28
Identity = 81/206 (39.32%), Postives = 114/206 (55.34%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV+ I G GTV  GRVE G LK
Sbjct:   50 VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLTKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTISGRGTVVTGRVERGTLK 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RICTY (Elongation factor Tu OS=Rickettsia typhi GN=tuf PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28
Identity = 75/208 (36.06%), Postives = 113/208 (54.33%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+   ++P +    +   EG    E++ N        L++A+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G
Sbjct:   50 IDAAPEEKERGITISTAHVEYETNNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGNEIPIIKGSALQALEGKPEGEKAIN-------ELMNAVDSYIPQPIRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28
Identity = 88/248 (35.48%), Postives = 132/248 (53.23%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +  E+N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W K    L+DA+D +I +P R +D+P  +P++DV+ I G GTV  GRVE GV+
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLHDKYPELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_LACS16.566e-2835.18Elongation factor Tu OS=Lactobacillus salivarius s... [more]
EFTU_CORJK6.566e-2835.80Elongation factor Tu OS=Corynebacterium jeikeium (... [more]
EFTU_CLOK56.566e-2835.89Elongation factor Tu OS=Clostridium kluyveri (stra... [more]
EFTU_CHLPB6.566e-2834.82Elongation factor Tu OS=Chlorobium phaeobacteroide... [more]
EFTU_BARHE6.566e-2834.82Elongation factor Tu OS=Bartonella henselae GN=tuf... [more]
EFTU1_ORITB6.566e-2838.83Elongation factor Tu 1 OS=Orientia tsutsugamushi (... [more]
CYSNC_PSEAE6.566e-2831.94Bifunctional enzyme cysN/cysC OS=Pseudomonas aerug... [more]
EFTU_UREU18.576e-2839.32Elongation factor Tu OS=Ureaplasma urealyticum ser... [more]
EFTU_RICTY8.576e-2836.06Elongation factor Tu OS=Rickettsia typhi GN=tuf PE... [more]
EFTU_MYCSS8.576e-2835.48Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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