EY659394

Overview
NameEY659394
Unique NameEY659394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12605 contig Csv1_Contig12605:810..1352. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_LEGPH (Malate dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=mdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.577e-12
Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  GLI+SFP    +GE  +V+ L  ++F R++ + T  EL  E+
Sbjct:  220 FVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSER 320          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_LEGPC (Malate dehydrogenase OS=Legionella pneumophila (strain Corby) GN=mdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.577e-12
Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  GLI+SFP    +GE  +V+ L  ++F R++ + T  EL  E+
Sbjct:  220 FVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSER 320          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_LEGPA (Malate dehydrogenase OS=Legionella pneumophila (strain Paris) GN=mdh PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.577e-12
Identity = 39/101 (38.61%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   19 FITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            F++TVQQRGAA+IKAR               +   V  TP G   SM   S G Y V  GLI+SFP    +GE  +V+ L  ++F R++ + T  EL  E+
Sbjct:  220 FVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSER 320          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_COXBU (Malate dehydrogenase OS=Coxiella burnetii GN=mdh PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.271e-11
Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 1
Query:   16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            +FI+ +QQRGAA+IKAR             D +   +  TP     S+ + + G Y V  GLI+SFP    NG  ++++ +  +EF ++KL  T +EL EE+
Sbjct:  218 DFISVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLIFSFPCRTENGVVSVIEEIEHNEFGQQKLKETLDELREER 319          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_COXBR (Malate dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=mdh PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            +FI  +QQRGAA+IKAR             D +   +  TP     S+ + + G Y V  GLI+SFP    NG  ++++ +  +EF ++KL  T +EL EE+
Sbjct:  218 DFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLIFSFPCRTENGVVSVIEEIEHNEFGQQKLKETLDELREER 319          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_COXBN (Malate dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=mdh PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            +FI  +QQRGAA+IKAR             D +   +  TP     S+ + + G Y V  GLI+SFP    NG  ++++ +  +EF ++KL  T +EL EE+
Sbjct:  218 DFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLIFSFPCRTENGVVSVIEEIEHNEFGQQKLKETLDELREER 319          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_COXB1 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuK_Q154) GN=mdh PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            +FI  +QQRGAA+IKAR             D +   +  TP     S+ + + G Y V  GLI+SFP    NG  ++++ +  +EF ++KL  T +EL EE+
Sbjct:  218 DFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGQYGVDEGLIFSFPCRTENGVVSVIEEIEHNEFGQQKLKETLDELREER 319          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH_COXB2 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=mdh PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.060e-11
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1
Query:   16 EFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            +FI  +QQRGAA+IKAR             D +   +  TP     S+ + + G Y V  GLI+SFP    NG  ++++ +  +EF ++KL  T +EL EE+
Sbjct:  218 DFIPVIQQRGAAVIKARGASSAASAANAALDSVWSLINTTPADDNYSVALCAQGRYGVDEGLIFSFPCRTENGVVSVIEEIEHNEFGQQKLKETLDELREER 319          
BLAST of EY659394 vs. ExPASy Swiss-Prot
Match: MDH1B_BRAFL (Putative malate dehydrogenase 1B OS=Branchiostoma floridae GN=MDH1B PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.631e-11
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 1
Query:    7 VRGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 321
            + GEF+  +Q R   I  + +              +  W  G+PEG   S+ V S+G YN+P G+++SFPV    G W +VQ + ++E  R  L     +L EEK
Sbjct:  354 LEGEFLEQLQSRSHTIQDSLQHSADLSMAAAISSTLSYWWNGSPEGQLFSLAVCSEGFYNIPEGVVFSFPVMFHKGSWEVVQDIDMNEDMRVMLSSITAQLVEEK 458          
The following BLAST results are available for this feature:
BLAST of EY659394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
MDH_LEGPH4.577e-1238.61Malate dehydrogenase OS=Legionella pneumophila sub... [more]
MDH_LEGPC4.577e-1238.61Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_LEGPA4.577e-1238.61Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_COXBU2.271e-1135.29Malate dehydrogenase OS=Coxiella burnetii GN=mdh P... [more]
MDH_COXBR3.874e-1135.29Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXBN3.874e-1135.29Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB13.874e-1135.29Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB25.060e-1135.29Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH1B_BRAFL8.631e-1132.38Putative malate dehydrogenase 1B OS=Branchiostoma ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659394 ID=EY659394; Name=EY659394; organism=Citrus sinensis; type=EST; length=543bp
CCACGCGTCCGTGGAGAATTCATAACCACAGTCCAACAACGTGGTGCTGC
AATCATCAAAGCCAGAAAGCTCTCGAGTGCTCTGTCTGCTGCTAGCTCTG
CTTGTGACCATATCCGTGATTGGGTTCTTGGAACTCCTGAGGGCACCTGG
GTCTCCATGGGGGTATACTCTGATGGTTCATACAATGTACCAGCTGGGCT
CATTTACTCATTCCCAGTAACCTGCCGCAACGGTGAATGGACAATTGTTC
AAGGACTCAGCATTGATGAATTCTCAAGGAAGAAGTTGGACTTGACAGCA
GAGGAGCTCTCCGAGGAGAAGGCCCTCGCATACTCATGTCTCTCTTAAAT
GCTTTCTTCCCTTCAATAGTGTGTTACCAAGGCCCTTAGCTTTGTCTGAG
TAGTTGGTATAGTTACAGTTTCGAATAAAACCATTGTTGAAACCTGGAGG
AACCATTGATGATGGAGAAGGCTTTCCATCTTATGTTGCTATTTCTGCAT
TTGAATATCGGGATTTTGGAGTTTTGTCTTCCCCGGGGAATAA
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