EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:598..1460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIY (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIL (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIK (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULIA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus islandicus (strain M.16.27) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 2
Query:   56 AEEVETAIPSGLTRES-PYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            +E  E  IP  L RE+ P L         +E E++R+   L      +   ++PLGSCTMK N   E          + HP    D  QG  EM   L  W   ITG D  SLQ  AG+AGE+AG+++I+ YH+    ++++  ++  +AHGTNPA+AAM G K++ V ++ +G ++++ LR   E   D  +  M+T P+T G++EE I EI KIIH     +Y DGAN+N
Sbjct:   36 SEIKEMKIPKNLLRENGPNLPSL------SELEVVRHFIRLSQMNFGVDVGIMPLGSCTMKYNPKIEEKATAITE--SHHPLEDEDHVQGILEMIYELQNWFSEITGMDECSLQVPAGSAGEFAGVLMIKKYHEDHNRNYKDTMLVADTAHGTNPASAAMAGYKVMYVKSNGEGLVDMDILR---EIVNDKTAGFMLTNPNTLGLFEENILEISKIIHSANAILYYDGANLN 256          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_RHOBA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Rhodopirellula baltica GN=gcvPB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.858e-34
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 2
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +++R+   L +  +S+     PLGSCTMK N        + P F N+HP       QG  E+   L      I+G    S+QP AGA GE A L+V  AY + +G   RNV +   SAHGTNPA+A M G K  +V ++A G +++E+L+   +   D  +  M+T P+T G+++  I+EI K++HD G  +Y+DGANMNA
Sbjct:   54 EGDVVRHFVGLSTLNMSVDTHFYPLGSCTMKYNPKRNERIASLPGFLNVHPLQHESGLQGLLELLYELQGMFAEISGLPGVSMQPAAGAHGELAALLVAAAYFREQGS-DRNVVLTADSAHGTNPASAQMAGFKTKTVKSNANGLVDLEDLKAKLD---DKTAVFMLTNPNTLGLFDRQIEEINKLVHDAGALIYLDGANMNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_SULTO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Sulfolobus tokodaii GN=gcvPB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.959e-33
Identity = 81/232 (34.91%), Postives = 131/232 (56.47%), Query Frame = 2
Query:   53 LAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748
            L +E+   IP  L R+   L +       +E E++R+   L      + + M+PLGSCTMK N   E          N+HP       QG  E+   + +WL  ITG D  SLQ  AGAAGE AG+++I+ YH+ +G  +R+  ++  +AHGTNPA+A+M   K++ + ++++G ++++ L+   E   +  +  M+T P+T G++EE I +I K IH    ++Y DGAN+N
Sbjct:   32 LKKEISINIPEKLRRKEIDLPEL------SELEVIRHFIRLSQMSFGVDNGMVPLGSCTMKYNPKIEEEAELLTQ--NLHPLQDDSTVQGILEVLYYMQKWLAEITGMDLCSLQVPAGAAGELAGVLMIKKYHETKGRGNRDEMLVADTAHGTNPASASMENFKVIYIKSNSEGLVDVDILK---EIVSERTAGFMLTNPNTLGLFEENILDIAKYIHSVDAKLYYDGANLN 252          
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_SULIY5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIN5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIM5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIL5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIK5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULIA5.858e-3437.50Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_RHOBA5.858e-3438.92Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_SULTO4.959e-3334.91Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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