EY659350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURM1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvP PE=3 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.225e-83 Identity = 146/255 (57.25%), Postives = 189/255 (74.12%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A E A+P+ L R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + NL+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPSVDALDAGLGGEAALPASLVRTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.824e-83 Identity = 146/255 (57.25%), Postives = 189/255 (74.12%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + NL+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURA4 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain MC40-6) GN=gcvP PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.824e-83 Identity = 145/255 (56.86%), Postives = 190/255 (74.51%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + ++L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPSVDALDAGAAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SHEFN (Glycine dehydrogenase [decarboxylating] OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvP PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.783e-83 Identity = 144/255 (56.47%), Postives = 187/255 (73.33%), Query Frame = 2 Query: 8 LLFAG-GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 +L AG G V A + +IP L R+ LT P FN+Y +E E++RYI L++K+L+L HSMI LGSCTMKLNA EM+PV+WP FAN+HPF P DQAQGY ++ N L E+L ITG+DS +QPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GMK+V D +GN+++E+LR A D+LS +M+TYPSTHGVYEE I E+C+I+H GGQVY+DGANMNA LT+ Sbjct: 440 ILGAGHGLDVATFDADIVANGSQSIPDALVRQDAVLTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFCPLDQAQGYTQLINELSEFLVKITGYDSVCIQPNSGAQGEYAGLLAIKKYHESRGDAHRNICLIPQSAHGTNPASAQLAGMKVVVTACDKQGNVDLEDLRTKAAELADSLSCIMITYPSTHGVYEESIREVCEIVHQYGGQVYLDGANMNAQVGLTS 694 HSP 2 Score: 22.7126 bits (47), Expect = 9.783e-83 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 766 SPGYIGADVCISSPQHLHSH 825 SPG+IGADV HL+ H Sbjct: 694 SPGFIGADV-----SHLNLH 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.164e-82 Identity = 145/255 (56.86%), Postives = 190/255 (74.51%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + ++L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPSVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEAE (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas aeruginosa GN=gcvP1 PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.164e-82 Identity = 144/254 (56.69%), Postives = 195/254 (76.77%), Query Frame = 2 Query: 8 LLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 LL G+++P AA LA +P L R+S L+ P+FN++H+E EL+RY+ L K+L+L +MIPLGSCTMKLNA +EM+PVTW F N+HPFAPA+Q++GY+++ + L LC+ TG+D+ SLQPNAG+ GEYAGL+ IRAYH++RGD R++C+IP SAHGTNPATA+M GM++V V DA+GN+++E+LR A +++ L+ LM+TYPSTHGV+EE I EIC I+HD GGQVY+DGANMNA L A Sbjct: 444 LLAEEGQALPDFAA-LAASSGDRLPVELLRQSAILSHPIFNRHHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSEGYRQLTDELEAMLCSATGYDAVSLQPNAGSQGEYAGLLAIRAYHQSRGDSQRDICLIPSSAHGTNPATASMVGMRVVVVACDARGNVDVEDLRNKASEHKERLAALMITYPSTHGVFEEAIREICAIVHDCGGQVYIDGANMNAMVGLCA 696
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURVG (Glycine dehydrogenase [decarboxylating] OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvP PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.520e-82 Identity = 145/255 (56.86%), Postives = 190/255 (74.51%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAP++Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL+VI AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + ++L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPDVDALDAGLPGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPSEQTAGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLVIHAYHASRGEAHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURCJ (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvP PE=3 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.985e-82 Identity = 145/255 (56.86%), Postives = 189/255 (74.12%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + +L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSKDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_CITK8 (Glycine dehydrogenase [decarboxylating] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvP PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.171e-82 Identity = 136/232 (58.62%), Postives = 179/232 (77.16%), Query Frame = 2 Query: 74 AIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 +I + R+ LT PVFN+YH+E E++RY+H L+ K+L+L +MIPLGSCTMKLNA EM+P+TWP FA +HPF PA+QA+GY +M N L +WL +TG+D+ +QPN+GA GEYAGL+ IR YH++R D HR++C+IP SAHGTNPA+A M GM++V V D GNI++ +LR AE DNLS +MVTYPSTHGVYEE I E+C+I+H GGQVY+DGANMNA +T+ Sbjct: 462 SIQESMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPAEQAEGYHQMINQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNDGHRDICLIPASAHGTNPASAQMAGMQVVVVACDKNGNIDLADLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITS 693 HSP 2 Score: 22.7126 bits (47), Expect = 2.171e-82 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 766 SPGYIGADVCISSPQHLHSH 825 SPG+IGADV HL+ H Sbjct: 693 SPGFIGADV-----SHLNLH 707
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU5 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas stutzeri (strain A1501) GN=gcvP PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.593e-82 Identity = 148/248 (59.68%), Postives = 186/248 (75.00%), Query Frame = 2 Query: 11 LFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEEL-RKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 +F G AA A E+ IP+GL R+S YL PVFN +H+E E+LRY+ L++K+L+L +MIPLGSCTMKLNAT+EM+P+TW FAN+HPF P QAQGY+ M L WLC ITGFD+ S+QPN+GA GEYAGL+ IR YH++RG+ R++C+IP SAHGTNPA+A M M++V V D GN+++E+L RKAAEA D LS LM+TYPSTHGVYEE + EIC IH GGQVYMDGAN+NA Sbjct: 440 IFLGADHGLDVAALDAGELAAGIPAGLQRDSGYLEHPVFNSHHSETEMLRYLKQLENKDLALNQAMIPLGSCTMKLNATSEMIPITWAEFANLHPFVPRGQAQGYRLMIEELEAWLCAITGFDAISMQPNSGAQGEYAGLVAIRKYHESRGEGQRDICLIPSSAHGTNPASAQMVSMRVVIVECDKGGNVDLEDLKRKAAEAG-DRLSCLMITYPSTHGVYEENVREICAAIHAQGGQVYMDGANLNA 686 The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bpback to top |