EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.048e-25
Identity = 68/230 (29.57%), Postives = 113/230 (49.13%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDG-------------------QIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            G   +H  P+  G      I R+++ G+ +T+ L + ++ R Y      E  I+  +KEK+ +V+ D++++L+ AK + S++  Y LPD                    Q + +G ERF  PE+LF PS+I ++ +G+ ET   SI     + R  L  NIV+ GG    PG   R+ K++  L PS   +K     +  ++   GG +L     F  + ++K EYDE G
Sbjct:  140 GFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFRHYNMMD--ETYIINRVKEKVCFVSQDFDKDLDLAKKTKSLQVEYALPDYKTTKLGYVVDRKQHDISELQTLKLGNERFTMPEILFDPSIIDLQQSGLCETIAESIQASPKEFRSLLCSNIVIVGGCAKLPGFQSRLEKDLRPLIPSEYHMKTRLDDKPDFTTLQGGKVLVDQPGFSNLCVTKQEYDEYG 367          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.050e-25
Identity = 72/239 (30.13%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDG--------QIITIGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS----------------SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 653
            GDG +H VP+ +GY +  +I  + + G+D+T  + ++L ERG         ++ R +KE   Y   D  +E    K      K  +   G            IG ERF  PE+ F P +   +    +H      I    +D R+ LY NIVLSGGSTMF     R+ +++  +  +                 +++ VV+ P ++Y+VW GGS+LAS + F +   +K EY+E G SI
Sbjct:  181 GDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 417          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.050e-25
Identity = 72/239 (30.13%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDG--------QIITIGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS----------------SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 653
            GDG +H VP+ +GY +  +I  + + G+D+T  + ++L ERG         ++ R +KE   Y   D  +E    K      K  +   G            IG ERF  PE+ F P +   +    +H      I    +D R+ LY NIVLSGGSTMF     R+ +++  +  +                 +++ VV+ P ++Y+VW GGS+LAS + F +   +K EY+E G SI
Sbjct:  181 GDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 417          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP3_SCHPO (Actin-related protein 3 OS=Schizosaccharomyces pombe GN=act2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24
Identity = 72/238 (30.25%), Postives = 113/238 (47.48%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTT--TAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPD----GQIITIGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    ++  TAER     +KE+  YV  D  +E             Y           I +G ERF  PE+ F P +   +    + E   N +    +D+RK LY NIVLSGGST+F    +R+ +++  +                  + + V++   ++ +VW GGS+LA    F     +K +Y+E G SI  R
Sbjct:  187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARR 419          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.977e-24
Identity = 65/235 (27.66%), Postives = 116/235 (49.36%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS---VEKNYELPD---------------------GQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            G   +H VP   G  +   I R+D+ G+ LT+ L ++++ R        E  +V  +KE + +VA D++Q ++   S      V  +Y LPD                      Q++++  ERF  PE+LF PS IG++  GI E   + +  C  +  ++L  NI++ GGS  FPG   R+ +++ AL P  +++ ++ P +     W GG  +A+   F++   ++ +Y+E G
Sbjct:  159 GYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRH--LNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYEEYG 391          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT10_SOLTU (Actin-85C (Fragment) OS=Solanum tuberosum GN=AC85C PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.582e-24
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMK 185
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+K
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVK 195          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 76/257 (29.57%), Postives = 120/257 (46.69%), Query Frame = 3
Query:   18 GVSHTV--PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETA------------KSSSSVEKNYELPDGQ---------------------------IITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 665
            G SHT   PI +G  L  AI RLD+ G+ +T+ L ++L+ R   F    E  IV +MKE + Y +LD++ +LE               S + + K+Y LPD                             ++T+  ERF  PE+LF PS IG+   GI +    S++   + +   L  NIV+ GG+++  G   R+  EI    P   +++V  P +   S W+G +  A      ++ ++K EY+E G + V RK
Sbjct:  183 GYSHTTVTPILQGRPLHPAIRRLDVGGKLMTNYLTRLLSVRH--FDMRNEPYIVNEMKEAVCYTSLDFKGDLEKTWKGTRGEKREDYLSGAGIAKDYVLPDSHTRFHGVVRDYEPGVSARARKGIVSTEDVLTLRNERFVVPELLFNPSDIGIRQPGIADLVKQSLLAVPIGLWPGLLANIVVVGGNSLSEGFCQRLQTEILKRFPDECRVRVARPEDPIISTWLGAANFAKHEHASKLEVTKQEYEEHGAAWVARK 437          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23
Identity = 73/238 (30.67%), Postives = 113/238 (47.48%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQEL-----ETAKSSSSVEKNYELPDGQIIT--IGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS----------------SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 653
            GDG +H VP+ EGY +   I  + +AG+D+T  + +++ ERG         ++ R +KE   Y   D  +E      E AK      K  +   G   T  +G ERF  PEV F P +   +    +       I    +D R+ LY NIVLSGGSTMF     R+ +++  +  +                 +++ VV+ P ++++VW GGS+L+S   F     +K EY+E G SI
Sbjct:  180 GDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQ-WKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23
Identity = 72/238 (30.25%), Postives = 120/238 (50.42%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETA--KSSSSVEKNYELPD------------------GQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 665
            G   +H +P+ +      A+ R+D+ G+ LT+ L ++++ R Y      E  IV ++KE + YV+ ++++++E    K  S +E  Y LPD                   Q++ +  ERF  PE+LF PS I +  AGI E    S+     +I+  L  N+V  GG+  FPG   R+S E+ +LAP++ ++KV  P +     W   S +  L  +    I++ EY E G +I+ RK
Sbjct:  164 GYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKY--NMMEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLLENVVTIGGNCKFPGFHKRLSSELRSLAPANWEVKVFEPSDPICFPWKKASHM-PLEHWNANKITRSEYSEHGANIMTRK 398          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23
Identity = 77/263 (29.28%), Postives = 121/263 (46.01%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG--------------------------------YMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGME-------AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPS-IVHRKCF 671
            G  V+   P+ +G  L     R   AG  L   + K+L  RG                                + FT      I+ + K+ +  V    +  L    S  + ++ +E P G   T GA+R    E LF+PS    +       A G+ E   ++I   +VD+R  L  NIV++GG ++  G++DR+SK++T  A S +K++V A     ER++  WIGGS+L SL +F Q+W+SK E+ E G   +V +K F
Sbjct:  173 GSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFEIKNKKAVEMGEPPVFTKRELPNVTHSFTDLQVSRILSEFKDSMCQVN---DVPLTPEISGEAADRVFEFPTGYSTTFGADRLSTSESLFKPSEYPFDGETVPDTARGLSEMVVDTINASNVDVRAHLANNIVITGGGSLVQGLSDRVSKDVTQ-ALSGLKVRVAAASNQEERRHGAWIGGSVLGSLGSFHQLWVSKQEWQEKGGDYLVEKKRF 431          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ARP6_YARLI1.048e-2529.57Actin-like protein ARP6 OS=Yarrowia lipolytica GN=... [more]
ARP3_ORYSJ3.050e-2530.13Actin-related protein 3 OS=Oryza sativa subsp. jap... [more]
ARP3_ORYSI3.050e-2530.13Actin-related protein 3 OS=Oryza sativa subsp. ind... [more]
ARP3_SCHPO1.514e-2430.25Actin-related protein 3 OS=Schizosaccharomyces pom... [more]
ARP6_DROME1.977e-2427.66Actin-like protein 13E OS=Drosophila melanogaster ... [more]
ACT10_SOLTU2.582e-2494.83Actin-85C (Fragment) OS=Solanum tuberosum GN=AC85C... [more]
ARP6_NEUCR1.281e-2329.57Actin-like protein arp-6 OS=Neurospora crassa GN=a... [more]
ARP3_ARATH2.186e-2330.67Actin-related protein 3 OS=Arabidopsis thaliana GN... [more]
ARP6_SCHPO2.855e-2330.25Actin-like protein arp6 OS=Schizosaccharomyces pom... [more]
ARP4_YARLI2.855e-2329.28Actin-related protein 4 OS=Yarrowia lipolytica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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