EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_CAEEL (Actin-like protein C08B11.6 OS=Caenorhabditis elegans GN=C08B11.6 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.572e-19
Identity = 63/227 (27.75%), Postives = 116/227 (51.10%), Query Frame = 3
Query:   48 GYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKS---SSSVEKNYELPD-----------------GQI--ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKV---VAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 653
            G  +  +++R+D+ G+ LT+ L   ++ R      + E  ++ + KE L +V+ ++++ ++ A++    ++  K Y +PD                  QI  I +G ERF  PE+LF PS I ++  G+ E    SI +C   +R  L  NI++ GGS+ FPG  +R+ +E+ ++ P+   + V   V  P+     W  G  L  L+  +  WI++ ++DE G S+
Sbjct:  163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = 3
Query:  177 DMKEKLAYVALDYEQELE---TAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            D+K K     +    E++   T  ++++ E++ E    Q++++  ERF  PE+LF PS IGM  AG+ E+   SI   + ++   LY NI+L GGST+FPG+ +R+  E+  LAP    I +  P +   S   GG  LA    + +  ISK +Y+E G +  ++K F
Sbjct:  327 DIKSKEEGEEIKLNDEIKKDSTTTTNTTKEEDME----QVLSLVNERFTVPELLFNPSDIGMNQAGLAESIVQSINCTNSNLHIPLYSNIILLGGSTLFPGLKERLELELRKLAPEQYNINIFQPQDPILSPLYGGIRLAQQPDYLKYSISKQDYEEYGYNYCNKKFF 490          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP8_ARATH (Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 3
Query:  171 VRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCD---VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK--IKVVAPPERKYSVWIGGSILASLSTFQQMW 614
            VR +KEKL YVALDY+ EL     S   + + E+      T+  ERF+  E+LFQP L GM A  +H+     +  CD   +      +  +VL+GGS   PG+++R+ +E+    PSS+   I+V+ PP    + W G  ++++LS F   W
Sbjct:  309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPW 456          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP4_YEAST (Actin-related protein 4 OS=Saccharomyces cerevisiae GN=ARP4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  354 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            E  G+ +  Y+SIM  DVD+R  L  N+VL+GG++  PG++DR+  E+  + P S+K +++      ER+Y  W+GGSIL SL TF Q+W+ K EY+E G
Sbjct:  381 ELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 479          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP4_CANGA (Actin-related protein 4 OS=Candida glabrata GN=ARP4 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  354 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            E  GI +   +SI  CDVDIR  L  N+V++GGS+  PG++DR+  E+    P+ +K +V+A     ER+Y  W+GGSIL+SL TF Q+WI K EY+E G
Sbjct:  385 ELPGIVDLISSSISSCDVDIRASLAHNLVITGGSSTIPGLSDRILNELNMKFPA-LKFRVLATGQSIERQYQSWLGGSILSSLGTFHQLWIGKKEYEEVG 483          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP4_KLULA (Actin-related protein 4 OS=Kluyveromyces lactis GN=ARP4 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.372e-17
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 3
Query:  354 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 647
            E AGI +    S+M+ DVD+R  L  N+VL+GG++  PG++DR+  E+    P+ +K ++++     ER+Y  W+GGSILASL TF Q+W+ + EY+E GP
Sbjct:  412 EVAGIVDLINKSMMEADVDLRATLAHNVVLTGGTSKIPGLSDRIMHELNKSLPA-LKFRMLSSGHLRERQYQGWLGGSILASLGTFHQLWVGREEYEEVGP 511          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.792e-17
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  354 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            E +G+ +  Y+SIM  DVD+R  L  N+V++GG++  PG+ DR+S E+    P ++K +++      ER+Y  W+GGSILASL TF Q+W+ K EY E G
Sbjct:  371 EVSGLADLIYSSIMSTDVDLRTTLSHNVVITGGTSSLPGLMDRISAELNRSLP-ALKFRMLTSGQLRERQYQGWLGGSILASLGTFHQLWVGKQEYAEVG 469          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.215e-17
Identity = 52/167 (31.14%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  171 VRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA-SLSTFQQMWISKGEYDESGPSIVHRKC 668
            + D++    +  L  E+     K  ++V+  + L     + +G ER R PE++FQPSLIG E AGI ET    + +   DI++ L  N+ L+GG+TM+PG+  RM KE+  + P     +V          W G    A +     ++WI++ EY+E G   +   C
Sbjct:  403 LEDVESMNDFDPLFSEETPGVEKPVTTVQPVFNLAAYHQLFVGTERIRAPEIIFQPSLIGEEQAGIAETLQYILDRYPKDIQEMLVQNVFLTGGNTMYPGMKARMEKELLEMRPFRSSFQVQLASNPVLDAWYGARDWALNHLDDNEVWITRKEYEEKGGEYLKEHC 569          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSJ (Actin-related protein 5 OS=Oryza sativa subsp. japonica GN=ARP5 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16
Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 3
Query:  171 VRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 662
            ++DM       A   +Q  E  K  +   ++Y       I+IG ERFRCPE+LFQP +IG++ AGI E    S+ +   D  +++ L  +I+++GG ++ PG+  R+   I    P    +K+V   +     W G +  A+ S F +   S  +Y E G ++ HR
Sbjct:  409 IQDMDPTFVNKAEAVQQTPEPPKVRTLTAEDYR------ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHR 568          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSI (Actin-related protein 5 OS=Oryza sativa subsp. indica GN=ARP5 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16
Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 3
Query:  171 VRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 662
            ++DM       A   +Q  E  K  +   ++Y       I+IG ERFRCPE+LFQP +IG++ AGI E    S+ +   D  +++ L  +I+++GG ++ PG+  R+   I    P    +K+V   +     W G +  A+ S F +   S  +Y E G ++ HR
Sbjct:  409 IQDMDPTFVNKAEAVQQTPEPPKVRTLTAEDYR------ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHR 568          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ARP6_CAEEL5.572e-1927.75Actin-like protein C08B11.6 OS=Caenorhabditis eleg... [more]
ARP6_DICDI1.241e-1833.93Actin-related protein 6 OS=Dictyostelium discoideu... [more]
ARP8_ARATH2.117e-1835.29Actin-related protein 8 OS=Arabidopsis thaliana GN... [more]
ARP4_YEAST2.117e-1844.00Actin-related protein 4 OS=Saccharomyces cerevisia... [more]
ARP4_CANGA6.160e-1847.00Actin-related protein 4 OS=Candida glabrata GN=ARP... [more]
ARP4_KLULA1.372e-1743.56Actin-related protein 4 OS=Kluyveromyces lactis GN... [more]
ARP4_ASHGO1.792e-1744.00Actin-related protein 4 OS=Ashbya gossypii GN=ARP4... [more]
ARP5_HUMAN5.215e-1731.14Actin-related protein 5 OS=Homo sapiens GN=ACTR5 P... [more]
ARP5_ORYSJ3.380e-1630.72Actin-related protein 5 OS=Oryza sativa subsp. jap... [more]
ARP5_ORYSI3.380e-1630.72Actin-related protein 5 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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