EY659321

Overview
NameEY659321
Unique NameEY659321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659321 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.575e-32
Identity = 80/203 (39.41%), Postives = 113/203 (55.67%), Query Frame = 3
Query:    9 VESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLWKGKE-PAWGEDPVINAAFEKFIGRLMEPEGIIDERNGDSTLVNRNGAGVXPYNLLKPYWEDGDKEKGGPYSISI 614
            +  D ELQA+W E+  VGH D K   WW  ++  + LIE  + +IW+AS  HAAVNFGQY Y  Y  NRPT +R  MP++   E  +    +  E A L T   ++  +  +  +++LS H+ DE++L +  E   W  D V   AF++F  +L E E  + +RN D +L NR G    PY LL P  E+G   +G P SISI
Sbjct:  666 IAQDAELQAFWKELVEVGHGDLKSATWWFKMQNRKELIEACSILIWIASALHAAVNFGQYPYGGYILNRPTKSRKFMPEKGTPE--YDDLAKNYEKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866          
BLAST of EY659321 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 57/186 (30.65%), Postives = 84/186 (45.16%), Query Frame = 3
Query:    6 LVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLWKGKEPAWGEDPVINAAFEKFIGRLMEPEGIIDERNGDSTLVNRNGAGVXPYNLLKP 563
            +VE D ELQ +  ++   G   KK   +   +K+ + L E LT +I+ AS  HAAVNFGQY + ++ PN P   R       PT K   T      + ++ T P++ ++   +  +  LS    +E FL    E  + E PV   A  +F   L     +I ERN +  L         PY  L P
Sbjct:  499 VVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA----PPPTAKGVVTI-----EQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMIRFRKNLEAIISVIAERNKNKKL---------PYYYLSP 665          
BLAST of EY659321 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 56/186 (30.11%), Postives = 83/186 (44.62%), Query Frame = 3
Query:    6 LVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLWKGKEPAWGEDPVINAAFEKFIGRLMEPEGIIDERNGDSTLVNRNGAGVXPYNLLKP 563
            +VE D ELQ +  ++   G   +K   +   +K+ + L E LT +I+ AS  HAAVNFGQY + ++ PN P   R       PT K   T      + ++ T P++ ++   +  +  LS    +E FL    E  + E PV   A  +F   L     +I ERN    L         PY  L P
Sbjct:  499 VVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA----PPPTAKGVVTI-----EQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVIAERNKKKQL---------PYYYLSP 665          
BLAST of EY659321 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 56/186 (30.11%), Postives = 84/186 (45.16%), Query Frame = 3
Query:    6 LVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPNRPTIARVNMPDEDPTEKFWKTFIEKPEDALLYTFPNQDQAILVIATLDLLSTHSPDEEFLWKGKEPAWGEDPVINAAFEKFIGRLMEPEGIIDERNGDSTLVNRNGAGVXPYNLLKP 563
            +VE D ELQ +  ++   G   +K   +   +K+ + L E LT +I+ AS  HAAVNFGQY + ++ PN P   R       PT K   T      + ++ T P++ ++   +  +  LS    +E FL    E  + E PV   A  +F   L     +I ERN +  L         PY  L P
Sbjct:  498 VVEEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA----PPPTAKGVVTI-----EQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMIRFRKNLEAIVSVIAERNKNKKL---------PYYYLSP 664          
The following BLAST results are available for this feature:
BLAST of EY659321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
LOX1_LENCU3.575e-3239.41Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOX5_MOUSE4.543e-1130.65Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOX5_HUMAN5.934e-1130.11Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
LOX5_RAT7.750e-1130.11Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659321 ID=EY659321; Name=EY659321; organism=Citrus sinensis; type=EST; length=928bp
AAAGTCTTGTCGAGTCTGATGATGAACTCCAAGCTTGGTGGACTGAAATT
CGAACTGTCGGACACGCTGACAAAAAGGATGAACCTTGGTGGCCTGTCCT
GAAAACCCCTCAGAATTTGATTGAAATCTTAACAACTATCATTTGGGTAG
CATCTGGTCACCATGCAGCTGTAAACTTTGGCCAATACACATATGCAGCC
TACTTCCCCAACAGGCCAACAATTGCAAGAGTAAACATGCCAGATGAAGA
TCCAACTGAAAAATTTTGGAAAACATTCATTGAAAAACCTGAAGATGCAC
TTTTGTACACCTTCCCCAATCAGGATCAAGCCATTCTAGTTATAGCCACC
CTCGATTTGCTATCGACTCATTCTCCTGATGAGGAGTTCTTATGGAAAGG
TAAGGAGCCAGCATGGGGTGAAGATCCAGTCATAAACGCTGCATTCGAGA
AGTTTATTGGCAGGTTGATGGAGCCTGAAGGAATTATTGATGAAAGGAAT
GGAGATAGCACTTTGGTGAATAGAAATGGAGCTGGGGTTNGTCCATATAA
TCTCTTGAAGCCATATTGGGAAGATGGAGACAAAGAGAAAGGAGGTCCAT
ACAGCATCTCTATCTAGACTCGCTGAAGTCCGGGTCTTGTGCCAAAACTT
TTCAATGCATGCATTTGGTGGTCGTCAACTTTAGTATGCATTGGATCTTT
TTATTTACCTGGAATAAATGCACAACGATCCTCGGTTTAATATGGTACTT
TTATAAATAAATTACCGGCTCACCCAAGGTTCTTAAAAAAAAAAAAAAAA
AAAGGCGGCCGTCTAAAAGATTCAAAGTTACGTACGCGGGCTGGCAAGGA
TTAATTTTTTAAAGGGCCCCAAATTCAATTACTGGGCCCTGTTTACAAAC
TGGGGGTGGGGAAACCCTGGGTTCCCAA
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