EY659320

Overview
NameEY659320
Unique NameEY659320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659320_ssr1 microsatellite EY659320_ssr1:1..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.610e-21
Identity = 78/243 (32.10%), Postives = 131/243 (53.91%), Query Frame = 3
Query:   54 QIIIMASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVDGQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNAN--L*LPMRRLKGQ*CFNNGM-LTPLLCPGEGPIIIKRLGHGKKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL 770
            +  +  S+    +E  N+   +GL+  I LP  ++A +EL+VFEIIS+AGP A+LS ++IVA+IP K  NP +AA +LDR+L +L + + L  S     R+Y L   S+  V  + D VS+ P +    DK  ++ ++ +K + L++ +    RT+         +  +    FN  M     +   E   + K   + K+LVDVGGG+ T+ + I +  P+ R +  +LP+ I D P +P +
Sbjct:   22 EFALRTSVDMAAQEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTK--NP-SAAISLDRILRMLGASSILSVSTTKSGRVYGLNEESRCLVA-SEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGV 260          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.610e-21
Identity = 86/242 (35.54%), Postives = 122/242 (50.41%), Query Frame = 3
Query:  114 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCS----FVDG-QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKG-----Q*CFNNGMLTPLLCPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            AM LASA VLP  +++ +ELD+ EI++K   G+ +S  EI +++P K  NPE A   LDR+L LL SY+ L CS      DG +R+Y L PV K+  + N DGVS+     +  DK+ ++ W+ LK   L   +      N    +      G        FNNGM           I +K++    K       LVDVGGG+  T  +I S  P  + +  DLP+ I+D P  P + H GG
Sbjct:   23 AMQLASASVLPMALKSALELDLLEIMAK--NGSPMSPTEIASKLPTK--NPE-APVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTK-NEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPF----NKAYGMSAFEYHGTDPRFNKVFNNGM------SNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGG 248          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.747e-21
Identity = 82/241 (34.02%), Postives = 116/241 (48.13%), Query Frame = 3
Query:  114 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSF--VDGQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            AM LASA VLP V+++ +ELD+ EII   G    +S  EI + +P    NP+A A  +DR+L LL  Y+ + CS   VD QR+Y LAPV K+  + N+DGVS+     +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++            LVDVGGG   T  +I S  P  R +  DLP+ I+D P +P + H GG
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASHLP--TTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTK-NQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGG------------IPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGG 226          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.119e-21
Identity = 87/274 (31.75%), Postives = 126/274 (45.99%), Query Frame = 3
Query:   66 MASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKA------GPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVDG-----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKG-----Q*CFNNGMLTPLLCPGEGPIIIKRL-------GHGKKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGGGFISKCLSGG 812
            MA+ AD+E       +A+ LAS+ +LP  ++  +EL + E +  A      G  A L+ AE+  ++P K N   AAA  +DR+L LL SYN + C   +G      R Y+ APV K ++  N DGVS+     +  DK+ ++ W+ LK   L   +      N    +      G        FN GM           II K+L            +VDVGGGV  T   + S  P+ R +  DLP+ I + PPFP + H GG   +    GG
Sbjct:    8 MAAAADEEA----CMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKAN--PAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCK-WLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPF----NKAYGMTAFEYHGTDARFNRVFNEGM------KNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGG 264          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.780e-20
Identity = 81/241 (33.61%), Postives = 115/241 (47.72%), Query Frame = 3
Query:  114 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSF--VDGQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            AM LA A VLP V+++ +ELD+ EII   G    +S  EI + +P    NP+A A  +DR+L LL  Y+ + CS   VD QR+Y LAPV K+  + N+DGVS+     +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++            LVDVGGG   T  +I S  P  R +  DLP+ I+D P +P + H GG
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASHLP--TTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTK-NQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGG------------IPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGG 226          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.666e-18
Identity = 76/249 (30.52%), Postives = 116/249 (46.59%), Query Frame = 3
Query:  114 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVDG----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKG-------------Q*CFNNGMLTPLLCPGEGPIIIKRL-------GHGKKLVDVGGGVRTTPNLIFS-NTPY*RVKSDLPYAIKDRPPFPAL-HTGG 782
            A+ LA+A   P ++++  EL + +I SKAG G  +S +EI +QI  K+ N   A   LDR+L LL S++ L C    G    QR+Y  AP+  +   N+  G SL P + L  DK+ ++ WF L    L+              +P +R  G                FN GM    +      +++K+L          K LVDVGG +    ++I + +T    +  DLP+ I D P +P + H GG
Sbjct:   25 AVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPN---APVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQG-SLGPLLVLHHDKVMMESWFHLNDYILEGG------------VPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTI------LVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGG 251          
The following BLAST results are available for this feature:
BLAST of EY659320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
SMT_COPJA1.610e-2132.10(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
OMT1_ARATH1.610e-2135.54Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT1_CHRAE2.747e-2134.02Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT1_ORYSJ6.119e-2131.75Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
OMT2_CHRAE1.780e-2033.61Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IMT1_MESCR1.666e-1830.52Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659320 ID=EY659320; Name=EY659320; organism=Citrus sinensis; type=EST; length=903bp
ATATATATATATATATATATATATATAGACACCTCAAGCAATTAAGAAAG
AAGCAAATTATAATCATGGCTTCTATAGCTGATCAGGAAGAAGAGACAAA
TAATTTCTCACATGCAATGGGACTTGCAAGTGCAATAGTGCTACCTGCAG
TTATGCAAGCAGTGGTAGAGCTTGATGTGTTTGAGATCATAAGCAAAGCC
GGTCCTGGTGCTAAGCTTTCGGTTGCGGAGATTGTGGCTCAAATTCCCTT
AAAAGATAATAATCCTGAAGCTGCAGCCACGACGTTGGATCGGGTGCTGA
TGCTGCTTGTCAGCTACAACGCTCTTCATTGCTCTTTTGTCGATGGACAA
AGGCTCTACTCTCTTGCTCCTGTTTCTAAACACTTTGTTCGCAACAATCG
AGACGGCGTGTCGTTGCGTCCCTACATGGCCTTGTGTCTCGACAAGATCT
GCTTGGATGGCTGGTTTGGATTGAAAATCATATTCTTGAAGGACGAATTG
CGTTTATAAAGCCGCACGAATGCAAATCTATGATTACCTATGCGGCGACT
CAAGGGTCAATGATGTTTCAATAATGGAATGTTAACCCCACTTCTTTGCC
CTGGAGAAGGGCCTATAATCATCAAAAGGCTTGGACATGGTAAAAAACTT
GTTGATGTGGGCGGCGGCGTTAGGACTACCCCTAACTTGATTTTTTCCAA
TACCCCTTATTAAAGGGTTAAATCTGATCTGCCCTATGCCATTAAAGATC
GCCCTCCTTTTCCTGCTCTGCACACCGGGGGGGGATTTATTTCGAAATGT
CTCTCGGGGGGGTACCATTGTTTACAGCGGGAGGCGCCCACTTTTGGGGG
TGAGCCACTCTCAATTGTGGGGACAATGCGCAAAAGTCCTCGCATGCGGG
GGA
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