EY659301

Overview
NameEY659301
Unique NameEY659301
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3764 contig Csv1_Contig3764:427..1349. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659301 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.406e-11
Identity = 66/248 (26.61%), Postives = 106/248 (42.74%), Query Frame = 3
Query:    3 YVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISA-------------GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTLL----------NTQNTINGFTKW-----AINNVSLTLPPTPYLGSIKYGLK-DAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAYAIMPNLSETHPWHLHGHDF 632
            YV+PFE + + I  G++ +VLL T    PS +++++A              V G     PP  T   +  TS   + L   PI P  +D + +  FSNK+ +L     P   P N  R+                  T  G T       +I+N+S T+P    L S   G     +    P     P N++       PP N   + G+ + +L  NT+V++++Q+   +    +E+HP HLHG +F
Sbjct:  249 YVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVTGQGTFDNSTVAGILEYEPPKQTKGAHSRTSIKNLQLF-KPILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCNHKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYTG-----TPPNNTMVSNGTNLMVLPYNTSVELVMQDTSILG---AESHPLHLHGFNF 487          

HSP 2 Score: 27.7202 bits (60), Expect = 3.406e-11
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  736 GWTALRIXADNPXAW 780
            GW A+R  ADNP  W
Sbjct:  523 GWAAIRFLADNPGVW 537          
BLAST of EY659301 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 9.667e-11
Identity = 68/239 (28.45%), Postives = 104/239 (43.51%), Query Frame = 3
Query:    3 YVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISA----GVRGRKPATPPALTLLNYHP---TSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPT-------NFHRRLTLLNTQNTINGFTKW--------AINNVSLTLPPTPYLGSIKYG-LKDAFDQNGP-----PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAYAIMPNLSETHPWHLHGHDF 632
            YV+PF VD + I  G++ +VLLT     P  +Y++ A      +G    T  A  L    P   T+A KI     P  P+ +D +   +F+ K+ +L  +  P          F   + L      +NG  +         +INNVS  LP T  L S   G  K  +  N P     P N++       PP N N   G+ V +L     V++++Q+   +    +E+HP HLHG +F
Sbjct:  254 YVKPFTVDTLIIAPGQTSNVLLTAKPTYPGASYYMLARPYTTTQGTFDNTTVAGVLEYDDPCPTTAAGKIVPIFSPTLPQINDTNAVSNFTAKLRSLASAGYPAAVPQQVDHRFFFTVGLGTHPCAVNGTCQGPNGSRFAASINNVSFVLPATALLQSHFAGKSKGVYASNFPYYPLNPFNYTG-----TPPNNTNVMNGTKVLVLPYGANVELVMQDTSILG---AESHPLHLHGFNF 484          

HSP 2 Score: 27.7202 bits (60), Expect = 9.667e-11
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  736 GWTALRIXADNPXAW 780
            GW A+R  ADNP  W
Sbjct:  520 GWVAIRFHADNPGVW 534          
The following BLAST results are available for this feature:
BLAST of EY659301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
LAC17_ARATH3.406e-1126.61Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC12_ORYSJ9.667e-1128.45Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659301 ID=EY659301; Name=EY659301; organism=Citrus sinensis; type=EST; length=924bp
ATTACGTGCAACCATTTGAAGTAGATGACATGGACATATATTCTGGTGAG
AGCTATTCGGTCTTATTAACAACAAATCAAGATCCCTCCTATAATTACTG
GATCTCAGCTGGTGTTAGGGGAAGAAAACCTGCAACCCCTCCGGCCCTAA
CACTCTTAAACTATCATCCCACTTCTGCTTCCAAAATCCCTCTCTCCCCA
CCACCTATAACCCCTAGATGGGACGACTATGATCACAGCAAATCATTCTC
CAACAAAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAAATTTCC
ACCGTCGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGGTTCACT
AAGTGGGCTATTAACAATGTGTCCCTGACTTTACCCCCCACTCCTTACTT
AGGATCCATCAAATATGGTCTTAAAGATGCTTTTGATCAGAATGGTCCCC
CCGAAAACTTCTCGAATGAGTATGACGTGATGAAACCTCCTGTAAACGCT
AATACAACTCTTGGAAGTGGGGTTTACATGCTTGGTTTAAACACCACAGT
TGATGTTATACTTCAAAATGCATACGCGATAATGCCAAACTTGAGTGAAA
CCCACCCTTGGCATTTGCATGGGCATGATTTTTNGGGTATTAGGGGCGCG
AGAAGGGAAAGTTACCAAAGAAGATGAGAAGAAATTTAACTTGAAGAATC
CANCATTGAAAAATACTGGCGTGATATTCCCATATGGCTGGACTGCTTTA
AGAATTGNTGCTGATAATCCANGTGCTTGGGGCATTCACTGNCATATTGA
GCCCCATTTNCATATGGAATGGGTGGTGGTTCTTGCTCTGGGGGTTGAAC
CGNNTGTAATATCCAAACCCAGCGTGGCCTGGGGTNGACTGGGAAAAGGT
CATGAACCTTAACAAAATGAGCTG
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