EY659298

Overview
NameEY659298
Unique NameEY659298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7469 contig Csv1_Contig7469:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19
Identity = 53/159 (33.33%), Postives = 76/159 (47.80%), Query Frame = 1
Query:  334 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGXP 795
            P  YDFDL  IG GSGG+ A++ AA F   V + +    T    T  G+GGTCV  GC+PKKL+  A+       +S  +GWK     +HDW  +  +  + +  L   Y+  L    +      G+ + PH +         K+YSA   LI+ G  P
Sbjct:  122 PGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLG-TRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERP 279          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_YARLI (Glutathione reductase OS=Yarrowia lipolytica GN=GLR1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.974e-19
Identity = 62/176 (35.23%), Postives = 96/176 (54.55%), Query Frame = 1
Query:  325 AELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQH----DWSTLIANKNAELQRLTGIYKNILINAGI-------TLIEGRGK---IVDPHTVDVDGKLYSARHILISVGGXPXIPDI 810
            A +P HYD+    IG GSGGV ++R AA++GA   + E             +GGTCV  GCVPKK++  AS  +    ++  +G+    +P++    DWS   A ++A ++RL GIY+  L   G+       TL +  G+   +V   + D + KLYSA+ I+I+ GG P +PD+
Sbjct:    2 ASIP-HYDY--LVIGGGSGGVASARRAASYGAKTLLIE----------GKALGGTCVNVGCVPKKVMWNASDLAGRIRQAKEYGFP-DVDPKYADNFDWSGFKAKRDAYVKRLNGIYERNLQKEGVEYVFGWATLYKQEGQEFPLVHVKSDDGNTKLYSAKKIMIATGGKPRLPDV 163          

HSP 2 Score: 24.6386 bits (52), Expect = 4.974e-19
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  813 GSEYAIDSDAALDLPSKAEKIAXV 884
            G+EY IDSD    L ++ +++A V
Sbjct:  165 GAEYGIDSDGFFALETQPKRVAVV 188          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_ASHGO (Glutathione reductase OS=Ashbya gossypii GN=GLR1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.465e-19
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 1
Query:  277 QCRRRHVAARAKSDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGW----KYGTEPQH-DWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKI-----VDPHTVDVDGKLYSARHILISVGGXPXIPD 807
            +CR  +   +    N  +   HYD+    IG GSGGV +SR AA++GA   + E             +GGTCV  GCVPKK++ YAS  +H    +  +G         E  H +W      +NA ++RL GIY+  L   G+  + G  +      V+    D   + Y+A HILI+ GG P +P+
Sbjct:    3 RCREVYNICKGAMSNEVK---HYDY--LVIGGGSGGVASSRRAASYGAKTVLIE----------GKALGGTCVNVGCVPKKVMWYASDLAHRLLHARDYGLLQEVDISKEKLHFNWKEFAGKRNAYVERLNGIYERNLAKEGVEYVHGWARFNSEGQVEVTRPDQTTEKYTADHILIATGGEPVLPE 174          

HSP 2 Score: 22.3274 bits (46), Expect = 6.465e-19
Identity = 8/21 (38.10%), Postives = 13/21 (61.90%), Query Frame = 3
Query:  813 GSEYAIDSDAALDLPSKAEKI 875
            G+EY +DSD    L  + +K+
Sbjct:  178 GAEYGVDSDGFFRLEEQPKKV 198          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR1_PIG (Thioredoxin reductase 1, cytoplasmic OS=Sus scrofa GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 9.992e-19
Identity = 57/165 (34.55%), Postives = 78/165 (47.27%), Query Frame = 1
Query:  319 NGAE-LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGXP 795
            NGAE LP  YD+DL  IG GSGG+ A++ AA F   V + +    T    T  G+GGTCV   C+PKKL+  A+       +S  +GW      +HDW  +       +  L   Y+  L    +T     G+ V PH +         K+YSA   LI+ G  P
Sbjct:    2 NGAEELPEMYDYDLIIIGGGSGGLAAAKEAARFNKRVMVLDFVTPTPLG-TRWGLGGTCVNVSCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERP 165          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR1_DROME (Thioredoxin reductase 1, mitochondrial OS=Drosophila melanogaster GN=Trxr-1 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.992e-19
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  343 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHT----VDVDGKLYSARHILISVGGXPXIPDI 810
            YD+DL  IG GS G+  ++ A   GA VA  +    T +  T  GVGGTCV  GC+PKKL+  AS       E+  +GW    + + DW  L+ +    ++ +  + +  L +  +  I G G  VD HT    +    +  +A+  +I+VGG P  PDI
Sbjct:  113 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDI 272          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR1_BOVIN (Thioredoxin reductase 1, cytoplasmic OS=Bos taurus GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.305e-18
Identity = 55/165 (33.33%), Postives = 79/165 (47.88%), Query Frame = 1
Query:  319 NGA-ELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-----KLYSARHILISVGGXP 795
            NG+ +LP  YD+DL  IG GSGG+ A++ AA +   V + +    T    T  G+GGTCV  GC+PKKL+  A+       +S  +GW      +HDW  +       +  L   Y+  L    +T     G+ V PH +         K+YSA   LI+ G  P
Sbjct:    2 NGSKDLPEPYDYDLIIIGGGSGGLAAAKEAAKYDKKVMVLDFVTPTPLG-TRWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERP 165          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_NEUCR (Glutathione reductase OS=Neurospora crassa GN=glr-1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.405e-18
Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = 1
Query:  334 PSHYDFDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGXPXIP 804
            P   + D   IG GSGG+  +R AA  +G    + E             +GGTCV  GCVPKK+  YA+  +    ++  +G+        DW T    ++A + RL GIY+  L N  +  + G  K++ P++V+V   DG   + +A+ ILI+VGG P IP
Sbjct:    3 PISRETDFLVIGGGSGGIATARAAAGKYGIKSMVVE----------GKRLGGTCVNVGCVPKKVTFYAALVAETIHQAKDYGFSVEQTAPFDWPTFKQKRDAYVARLNGIYERNLANDKVEYVHGWAKLLSPNSVEVTLDDGTKSVVNAKKILIAVGGNPTIP 155          

HSP 2 Score: 24.2534 bits (51), Expect = 2.405e-18
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3
Query:  813 GSEYAIDSDAALDLPSKAEKIAXV 884
            GSEY  +SD   D+ +  +K+A V
Sbjct:  160 GSEYGTNSDGFFDIDTLPKKVALV 183          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR_PLAF5 (Thioredoxin reductase OS=Plasmodium falciparum (isolate FCH-5) GN=TR PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  343 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVD--VDGKL-----YSARHILISVGGXPXIPD 807
            YD+D   IG G GG+ +++ AA  GA V + +      S  T  G+GGTCV  GCVPKKL+ YA      F  +S  +GWK+    +HDW  L+    + ++ L   Y   L ++ +  I G  K+ D +TV   + G L      + ++ILI+ G  P IPD
Sbjct:   40 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDY-VKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF-DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 200          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR2_PLAF7 (Thioredoxin reductase 2 OS=Plasmodium falciparum (isolate 3D7) GN=trxr2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.907e-18
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  343 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFD-ESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVD--VDGKL-----YSARHILISVGGXPXIPD 807
            YD+D   IG G GG+ +++ AA  GA V + +      S  T  G+GGTCV  GCVPKKL+ YA      F  +S  +GWK+    +HDW  L+    + ++ L   Y   L ++ +  I G  K+ D +TV   + G L      + ++ILI+ G  P IPD
Sbjct:  116 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDY-VKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF-DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 276          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_MOUSE (Glutathione reductase, mitochondrial OS=Mus musculus GN=Gsr PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.959e-18
Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  334 PSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH--TVDVDGKLYSARHILISVGGXPXIP 804
            P    FD   IG GSGG+ ++R AA  GA  A+ E          +  +GGTCV  GCVPKK++   +  S    +   +G++   E +  W  +   ++A + RL  IY+N L  + I +I G     D    TV+V+GK ++A HILI+ GG P +P
Sbjct:   38 PDTSSFDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQ-SCEGKFSWHVIKQKRDAYVSRLNTIYQNNLTKSHIEIIHGYATFADGPRPTVEVNGKKFTAPHILIATGGVPTVP 185          
The following BLAST results are available for this feature:
BLAST of EY659298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRXR1_MOUSE3.434e-1933.33Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]
GSHR_YARLI4.974e-1935.23Glutathione reductase OS=Yarrowia lipolytica GN=GL... [more]
GSHR_ASHGO6.465e-1932.62Glutathione reductase OS=Ashbya gossypii GN=GLR1 P... [more]
TRXR1_PIG9.992e-1934.55Thioredoxin reductase 1, cytoplasmic OS=Sus scrofa... [more]
TRXR1_DROME9.992e-1933.75Thioredoxin reductase 1, mitochondrial OS=Drosophi... [more]
TRXR1_BOVIN1.305e-1833.33Thioredoxin reductase 1, cytoplasmic OS=Bos taurus... [more]
GSHR_NEUCR2.405e-1833.74Glutathione reductase OS=Neurospora crassa GN=glr-... [more]
TRXR_PLAF52.907e-1835.58Thioredoxin reductase OS=Plasmodium falciparum (is... [more]
TRXR2_PLAF72.907e-1835.58Thioredoxin reductase 2 OS=Plasmodium falciparum (... [more]
GSHR_MOUSE4.959e-1835.22Glutathione reductase, mitochondrial OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659298 ID=EY659298; Name=EY659298; organism=Citrus sinensis; type=EST; length=919bp
ACAACCCAAATCGGAACTGAATTTGAAACCGAACCGAACGGAAAAAAATT
TCAACCTGTTTGAGTTGAAATCTTAAACCCGAATGGACCTGAACTGAAAA
CCCTAAAACCAAACTGAATAATTTTTAAAGAAATGGCAACTTCTGTTACA
ACTCCAAAGCTCACAACAACCTTCTATAACAGACTACCAATTACAGTCCC
ACTCTCTTCTCACTTTCTTTCGCTACAAAATACCCTAACTCCATTCTCTC
ACAATTGCTTCTCGCTTCTTTATTTTCAATGCCGACGCCGCCACGTTGCG
GCTCGAGCCAAGTCTGATAATGGAGCTGAGCTGCCGAGCCACTACGACTT
TGACCTCTTCACTATCGGTGCCGGCAGCGGTGGCGTCCGCGCCTCCCGTT
TTGCTGCCAATTTTGGCGCTTCTGTGGCCATTTGTGAACTTCCATTTTCC
ACCATTTCTTCCGAAACCACGGGCGGCGTTGGCGGCACGTGTGTACTTCG
TGGATGTGTGCCAAAGAAGCTTTTGGTGTACGCGTCAAAATTTTCTCATG
AATTCGATGAGAGTAATGGTTTTGGATGGAAATATGGGACGGAACCGCAG
CATGATTGGAGCACTTTGATTGCTAACAAAAATGCTGAGTTGCAGCGCCT
TACCGGTATCTACAAGAACATTCTAATCAATGCTGGCATTACCTTAATTG
AAGGTCGTGGAAAGATTGTGGACCCACACACTGTTGATGTGGATGGGAAA
CTGTATTCAGCTAGGCACATACTGATTTCGGTTGGGGGACNGCCTTNCAT
TCCTGACATTCTGGCAGTGAATATGCAATAGATTCTGATGCTGCCCTTGA
TTTGCCCTCGAAAGCTGAGAAAATTGCATTNGTTGTGGTGGNAACATTGC
CTNGNAATTGCTGGCATCT
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