EY659298

Overview
NameEY659298
Unique NameEY659298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7469 contig Csv1_Contig7469:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR2_MOUSE (Thioredoxin reductase 2, mitochondrial OS=Mus musculus GN=Txnrd2 PE=1 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 1.884e-17
Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHT---VDVDGK--LYSARHILISVGGXPXIP 804
            FDL  IG GSGG+  ++ AA  G  VA+ +         T  G+GGTCV  GC+PKKL+  A+       +++ +GW+     QH+W T+       ++ L   ++  L +  +     +   VD HT   VD  GK  L SA HI+I+ GG P  P
Sbjct:   40 FDLLVIGGGSGGLACAKEAAQLGKKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 195          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_HUMAN (Glutathione reductase, mitochondrial OS=Homo sapiens GN=GSR PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.884e-17
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIV-DPH-TVDVDGKLYSARHILISVGGXPXIP 804
            +D   IG GSGG+ ++R AA  GA  A+ E          +  +GGTCV  GCVPKK++   +  S    +   +G+    E + +W  +   ++A + RL  IY+N L  + I +I G      DP  T++V GK Y+A HILI+ GG P  P
Sbjct:   65 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFP-SCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTP 207          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR3_HUMAN (Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17
Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  343 YDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSE-TTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGXP 795
            YD+DL  IG GSGG+  ++ AA  G  V +  L F   S + T+ G+GGTCV  GC+PKKL+  A+       +S  FGW+Y  + +H+W T+       +  L   Y+  L    +  +   G+ V+ H +    K      Y+A   +I+ G  P
Sbjct:  266 YDYDLIIIGGGSGGLSCAKEAAILGKKVMV--LDFVVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIKATNKKGQETYYTAAQFVIATGERP 420          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR2_HUMAN (Thioredoxin reductase 2, mitochondrial OS=Homo sapiens GN=TXNRD2 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 54/182 (29.67%), Postives = 82/182 (45.05%), Query Frame = 1
Query:  274 FQCRRRHVAARAKSDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGXPXIP 804
            F+ R + VA   +           D+DL  +G GSGG+  ++ AA  G  VA+ +         T  G+GGTCV  GC+PKKL+  A+       ++  +GW+      HDW  +       ++ L   ++  L +  +     +   VD HTV    K     L SA HI+I+ GG P  P
Sbjct:   15 FRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVAVVDY-VEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 195          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_CALJA (Glutathione reductase, mitochondrial OS=Callithrix jacchus GN=GSR PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPH--TVDVDGKLYSARHILISVGGXPXIP 804
            +D   IG GSGG+ ++R AA  GA  A+ E          +  +GGTCV  GCVPKK++   +  S    +   +G+    E + +W  +   ++  + RL  IY+N L  A I +I G          T++V G+ Y+A HILI+ GG P  P
Sbjct:   65 YDYLVIGGGSGGLASARRAAELGARAAVVE----------SHKLGGTCVNVGCVPKKVMWNTAVHSEFLHDHGDYGFS-SCEGKFNWRVIKEKRDTYVSRLNTIYQNNLTKAHIEIIHGHAVFTSDTKPTIEVSGRKYTAPHILIATGGMPSSP 207          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR2_RAT (Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus GN=Txnrd2 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 56/174 (32.18%), Postives = 85/174 (48.85%), Query Frame = 1
Query:  298 AARAKSDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHT---VDVDGKL--YSARHILISVGGXPXIP 804
            AA A S  G +     +FDL  IG GSGG+  ++ AA  G  VA+ +         T  G+GGTCV  GC+PKKL+  A+       ++  +GW+     QH+W  +       ++ L   ++  L +  +     +   V+ HT   VD  GK+   SA+HI+I+ GG P  P
Sbjct:   29 AAGAASAAGGQ----QNFDLLVIGGGSGGLACAKEAAQLGRKVAVADY-VEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAQHYGWEVAQPVQHNWKAMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVNEHTVHGVDKAGKVTQLSAKHIVIATGGRPKYP 197          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_CAEEL (Probable glutathione reductase 2 OS=Caenorhabditis elegans GN=trxr-2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 60/185 (32.43%), Postives = 89/185 (48.11%), Query Frame = 1
Query:  286 RRHVAARAKSDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQ---HDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG-------KLYSARHILISVGGXPXIPDI 810
            +RH+  R        L S   FDL  IGAGSGG+  S+ AA+ GA+VA+ +    T    + G +GGTC   GC+PKKL+  A+    E   ++ +GW  G + +   HDW+ L  N N  ++    IY+  L    I       + VD   + + G          SA +++IS G  P  P+I
Sbjct:    7 KRHLPIR-------RLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPTPHGHSWG-IGGTCANVGCIPKKLMHQAAIVGKELKHADKYGWN-GIDQEKIKHDWNVLSKNVNDRVKANNWIYRVQLNQKKINYFNAYAEFVDKDKIVITGTDKNKTKNFLSAPNVVISTGLRPKYPNI 182          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_DICDI (Glutathione reductase OS=Dictyostelium discoideum GN=gsr PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.062e-16
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANF------GASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEP-QHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DGKLYSARHILISVGGXPXIPDI 810
            F    +GAGSGG+ ++R AA        G  + I E+             GGTCV  GCVPKK++   S      + +  +G+ +G +  + +W T+   ++  ++RL GIY + L    I  I G G+   P  + V   +G+ Y+A HILI+ GG P +PD+
Sbjct:    7 FTYLVLGAGSGGIASARRAAKHLNAKGNGDRIGIVEVTRP----------GGTCVNVGCVPKKVMWNTSFIKEMINAAPSYGFDFGGQQVKFNWPTIKKARDEYIKRLNGIYDSNLAKDNIVRINGYGRFSGPKEIQVNGANGEKYTADHILIAAGGRPTVPDV 160          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.062e-16
Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHD-----WSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV-----DGKLYSARHILISVGGXPXIPD 807
            FD   IG GSGGV +SR AA++GA   + E             +GGTCV  GCVPKK++ YAS  +     ++ +G         +     W      ++A + RL GIY+N L   G+ ++ G  K      V+V       ++YSA  IL++ GG P  P+
Sbjct:   17 FDYLVIGGGSGGVASSRRAASYGAKTLLIE----------GKALGGTCVNVGCVPKKVMWYASDLATRLTHAHEYGLAQNVPLSKESITFNWPEFKKKRDAYIHRLNGIYENNLKKEGVEVVFGWAKFNKDGNVEVTKHDNTTEVYSADRILVATGGKPVYPE 169          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TRXR1_CAEEL (Thioredoxin reductase 1 OS=Caenorhabditis elegans GN=trxr-1 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.304e-15
Identity = 58/177 (32.77%), Postives = 83/177 (46.89%), Query Frame = 1
Query:  310 KSDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSE-TTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGT-EPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGK-----LYSARHILISVGGXPXIPDILAV 819
            K D   E    + +DL  IG GSGG+ A++ A+  G  VA   L F   S + T+ G+GGTCV  GC+PKKL+  AS   H   ++  +GWK    + +H W+ L  +    +  L   Y+  L    +T I   G+   P  +    K       +A   LIS G  P  P+I  V
Sbjct:  160 KQDYLKEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVAC--LDFVKPSPQGTSWGLGGTCVNVGCIPKKLMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLREKTVTYINSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLRPKYPEIPGV 334          
The following BLAST results are available for this feature:
BLAST of EY659298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRXR2_MOUSE1.884e-1734.39Thioredoxin reductase 2, mitochondrial OS=Mus musc... [more]
GSHR_HUMAN1.884e-1735.71Glutathione reductase, mitochondrial OS=Homo sapie... [more]
TRXR3_HUMAN2.461e-1732.48Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 ... [more]
TRXR2_HUMAN2.083e-1629.67Thioredoxin reductase 2, mitochondrial OS=Homo sap... [more]
GSHR_CALJA2.083e-1633.77Glutathione reductase, mitochondrial OS=Callithrix... [more]
TRXR2_RAT3.554e-1632.18Thioredoxin reductase 2, mitochondrial OS=Rattus n... [more]
GSHR_CAEEL3.554e-1632.43Probable glutathione reductase 2 OS=Caenorhabditis... [more]
GSHR_DICDI6.062e-1632.32Glutathione reductase OS=Dictyostelium discoideum ... [more]
GSHR_CANGA6.062e-1633.13Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]
TRXR1_CAEEL2.304e-1532.77Thioredoxin reductase 1 OS=Caenorhabditis elegans ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659298 ID=EY659298; Name=EY659298; organism=Citrus sinensis; type=EST; length=919bp
ACAACCCAAATCGGAACTGAATTTGAAACCGAACCGAACGGAAAAAAATT
TCAACCTGTTTGAGTTGAAATCTTAAACCCGAATGGACCTGAACTGAAAA
CCCTAAAACCAAACTGAATAATTTTTAAAGAAATGGCAACTTCTGTTACA
ACTCCAAAGCTCACAACAACCTTCTATAACAGACTACCAATTACAGTCCC
ACTCTCTTCTCACTTTCTTTCGCTACAAAATACCCTAACTCCATTCTCTC
ACAATTGCTTCTCGCTTCTTTATTTTCAATGCCGACGCCGCCACGTTGCG
GCTCGAGCCAAGTCTGATAATGGAGCTGAGCTGCCGAGCCACTACGACTT
TGACCTCTTCACTATCGGTGCCGGCAGCGGTGGCGTCCGCGCCTCCCGTT
TTGCTGCCAATTTTGGCGCTTCTGTGGCCATTTGTGAACTTCCATTTTCC
ACCATTTCTTCCGAAACCACGGGCGGCGTTGGCGGCACGTGTGTACTTCG
TGGATGTGTGCCAAAGAAGCTTTTGGTGTACGCGTCAAAATTTTCTCATG
AATTCGATGAGAGTAATGGTTTTGGATGGAAATATGGGACGGAACCGCAG
CATGATTGGAGCACTTTGATTGCTAACAAAAATGCTGAGTTGCAGCGCCT
TACCGGTATCTACAAGAACATTCTAATCAATGCTGGCATTACCTTAATTG
AAGGTCGTGGAAAGATTGTGGACCCACACACTGTTGATGTGGATGGGAAA
CTGTATTCAGCTAGGCACATACTGATTTCGGTTGGGGGACNGCCTTNCAT
TCCTGACATTCTGGCAGTGAATATGCAATAGATTCTGATGCTGCCCTTGA
TTTGCCCTCGAAAGCTGAGAAAATTGCATTNGTTGTGGTGGNAACATTGC
CTNGNAATTGCTGGCATCT
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