EY659298

Overview
NameEY659298
Unique NameEY659298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7469 contig Csv1_Contig7469:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: DLDH_MYCPN (Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoniae GN=pdhD PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 41/150 (27.33%), Postives = 71/150 (47.33%), Query Frame = 1
Query:  346 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXP 795
            ++DL  IGAG  G  A+ +A        + E  +           GG C+  GC+P K L+  +K       +  +G     +   +W+ L+  K   + +L G  K I+ +A    + G  K++DP+TV+V GK Y+ + I+++ G  P
Sbjct:    2 NYDLIIIGAGPAGYVAAEYAGKHKLKTLVVEKEY----------FGGVCLNVGCIPTKTLLKRAKIVDYLRHAQDYGISINGQVALNWNQLLEQKGKVVSKLVGGVKAIIASAKAETVMGEAKVLDPNTVEVAGKTYTTKSIVVATGSRP 141          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: DLDH_ACHLA (Dihydrolipoyl dehydrogenase (Fragment) OS=Acholeplasma laidlawii GN=pdhD PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 44/158 (27.85%), Postives = 78/158 (49.37%), Query Frame = 1
Query:  346 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXPXIPDILAV 819
            ++++  +G G GG  A+  AA +GA VA+ E             VGG C+  GC+P K  + ++K  +   +S  FG     E   DWS +++ K+  +++LT     +L   G+ +  G G I   + V V+G+    ++++I+ G    +P I  V
Sbjct:    4 EYEIIIVGGGPGGYVAAIKAAQYGAKVALVEKEV----------VGGICLNHGCIPTKTFLKSAKVFNTVKKSMDFGVSTSGEVGFDWSKIVSRKDGVVKQLTNGVAFLLKKNGVDVYNGFGDIKSANEVVVNGESLKTKNVIIATGSSAVVPPIPGV 151          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_PLAFK (Glutathione reductase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=GR2 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.156e-13
Identity = 50/171 (29.24%), Postives = 79/171 (46.20%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG--------------KLYSARHILISVGGXPXIPDILAV 819
            +DL  IG GSGG+ A+R AA   A VA+ E             +GGTCV  GCVPKK++  A+      + S  +G  + T+   +   L+  ++  +QRL  IY+  L    + L EG    +  + + + G              ++   R+ILI+VG  P  P +  +
Sbjct:    3 YDLIVIGGGSGGMAAARRAARHNAKVALVE----------KSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYG--FDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGI 161          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: GSHR_PLAF7 (Glutathione reductase OS=Plasmodium falciparum (isolate 3D7) GN=GR3 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.156e-13
Identity = 50/171 (29.24%), Postives = 79/171 (46.20%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDG--------------KLYSARHILISVGGXPXIPDILAV 819
            +DL  IG GSGG+ A+R AA   A VA+ E             +GGTCV  GCVPKK++  A+      + S  +G  + T+   +   L+  ++  +QRL  IY+  L    + L EG    +  + + + G              ++   R+ILI+VG  P  P +  +
Sbjct:    3 YDLIVIGGGSGGMAAARRAARHNAKVALVE----------KSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYG--FDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGI 161          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: DLDH_THESC (Dihydrolipoyl dehydrogenase OS=Thermus scotoductus GN=lpd PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXP 795
            +DL  IG G GG  A+   A  G  V   E             VGG C+  GC+P K L++A++  H    + GFG K   +P+ D   L A ++  +++LTG    +L    + L+ G  +   P  ++V+G+ Y A+  +I+ G  P
Sbjct:    4 YDLIVIGTGPGGYPAAIRGAQLGLKVLAVE----------AAEVGGVCLNVGCIPTKALLHAAETVHHLKGAEGFGLK--AKPELDLKKLGAWRDGVVKKLTGGVAGLLKGNKVELLRGFARFKGPREIEVNGETYGAQSFIIATGSEP 140          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCR (Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 53/166 (31.93%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  349 FDLFTIGAGSGGVRASRFAAN-FGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYG-TEPQHDWSTLIANKNAELQRLTGIYKNILINA-GITLIEGRGKIVDPHTVDVDGKLYSA---------RHILISVGGXPXIPDI 810
            FDL  IGAGSGG+ A+  AA  +   VA+ ++            +GGTCV  GCVPKKL+V  +++     ES GFGW++  T  + +W  LIA K+  +  +   Y+ +  +  G+    G G +   + V+V      A          +IL++ G  P +P+I
Sbjct:    6 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQM-VHGPPFFSALGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNI 170          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: MERA_STAES (Mercuric reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=merA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  313 SDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRL-TGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXPXIPDILAVN 822
            S+N  +     D+DL  IG+G     A+  A   GA VA+ E           G VGGTCV  GCVP K ++ A +  +   ++N F     +    D + L   K+  + ++    Y +++   G  LI G    +D  T+ V+G+  +++  LI+ G  P +P+I  +N
Sbjct:   74 SENSVDFNRDGDYDLLIIGSGGAAFSAAIKANENGAKVAMVE----------RGTVGGTCVNIGCVPSKTMLRAGEI-NGLAQNNPFTGLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVNGQNITSKSFLIATGASPAVPEIPGMN 233          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: MERA_STAAU (Mercuric reductase OS=Staphylococcus aureus GN=merA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  313 SDNGAELPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRL-TGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXPXIPDILAVN 822
            S+N  +     D+DL  IG+G     A+  A   GA VA+ E           G VGGTCV  GCVP K ++ A +  +   ++N F     +    D + L   K+  + ++    Y +++   G  LI G    +D  T+ V+G+  +++  LI+ G  P +P+I  +N
Sbjct:   74 SENSVDFNRDGDYDLLIIGSGGAAFSAAIKANENGAKVAMVE----------RGTVGGTCVNIGCVPSKTMLRAGEI-NGLAQNNPFTGLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVNGQNITSKSFLIATGASPAVPEIPGMN 233          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: MERA_STRLI (Mercuric reductase OS=Streptomyces lividans GN=merA PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 53/166 (31.93%), Postives = 76/166 (45.78%), Query Frame = 1
Query:  331 LPSHYDFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTG-IYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGXPXIPDI 810
            L +H  +DL  IG+G+G   A+  A N G SV + E           G  GGTCV  GCVP K L+ A++  H    ++ F     TEP  D+  LI+ K+  + +L    Y ++    G  ++ G     D   ++V   DG      A H LI+ G  P  P I
Sbjct:    2 LQAHTGYDLAIIGSGAGAFAAAIAARNKGRSVVMVE----------RGTTGGTCVNVGCVPSKALLAAAEARHGAQAASRFPGIQATEPALDFPALISGKDTLVGQLRAEKYTDLAAEYGWQIVHGTATFADGPMLEVALNDGGTATVEAAHYLIATGSAPTAPHI 157          
BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: DLDH_MYCGE (Dihydrolipoyl dehydrogenase OS=Mycoplasma genitalium GN=pdhD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 38/150 (25.33%), Postives = 66/150 (44.00%), Query Frame = 1
Query:  346 DFDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDVDGKLYSARHILISVGGXP 795
            D+DL  +GAG  G  A+ +A        + E  +           GG C+  GC+P K L+  +K       +  +G     + + DW  L+  K   + +L    K I+  A +  IEG   ++D + V V+   Y+  +I+++ G  P
Sbjct:    2 DYDLIILGAGPAGYIAAEYAGKHKLKTLVIEKQY----------FGGVCLNVGCIPTKTLLKRAKIIDYLVHAKDYGITINGQAKLDWKQLLKQKQEVVDKLVAGVKTIIKGAKVESIEGEATVIDKNKVQVNNTTYTTNNIIVATGSRP 141          
The following BLAST results are available for this feature:
BLAST of EY659298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
DLDH_MYCPN1.651e-1327.33Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoni... [more]
DLDH_ACHLA1.651e-1327.85Dihydrolipoyl dehydrogenase (Fragment) OS=Acholepl... [more]
GSHR_PLAFK2.156e-1329.24Glutathione reductase OS=Plasmodium falciparum (is... [more]
GSHR_PLAF72.156e-1329.24Glutathione reductase OS=Plasmodium falciparum (is... [more]
DLDH_THESC4.803e-1330.20Dihydrolipoyl dehydrogenase OS=Thermus scotoductus... [more]
TYTR_TRYCR6.273e-1331.93Trypanothione reductase OS=Trypanosoma cruzi GN=TP... [more]
MERA_STAES5.311e-1228.65Mercuric reductase OS=Staphylococcus epidermidis (... [more]
MERA_STAAU5.311e-1228.65Mercuric reductase OS=Staphylococcus aureus GN=mer... [more]
MERA_STRLI1.183e-1131.93Mercuric reductase OS=Streptomyces lividans GN=mer... [more]
DLDH_MYCGE1.183e-1125.33Dihydrolipoyl dehydrogenase OS=Mycoplasma genitali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659298 ID=EY659298; Name=EY659298; organism=Citrus sinensis; type=EST; length=919bp
ACAACCCAAATCGGAACTGAATTTGAAACCGAACCGAACGGAAAAAAATT
TCAACCTGTTTGAGTTGAAATCTTAAACCCGAATGGACCTGAACTGAAAA
CCCTAAAACCAAACTGAATAATTTTTAAAGAAATGGCAACTTCTGTTACA
ACTCCAAAGCTCACAACAACCTTCTATAACAGACTACCAATTACAGTCCC
ACTCTCTTCTCACTTTCTTTCGCTACAAAATACCCTAACTCCATTCTCTC
ACAATTGCTTCTCGCTTCTTTATTTTCAATGCCGACGCCGCCACGTTGCG
GCTCGAGCCAAGTCTGATAATGGAGCTGAGCTGCCGAGCCACTACGACTT
TGACCTCTTCACTATCGGTGCCGGCAGCGGTGGCGTCCGCGCCTCCCGTT
TTGCTGCCAATTTTGGCGCTTCTGTGGCCATTTGTGAACTTCCATTTTCC
ACCATTTCTTCCGAAACCACGGGCGGCGTTGGCGGCACGTGTGTACTTCG
TGGATGTGTGCCAAAGAAGCTTTTGGTGTACGCGTCAAAATTTTCTCATG
AATTCGATGAGAGTAATGGTTTTGGATGGAAATATGGGACGGAACCGCAG
CATGATTGGAGCACTTTGATTGCTAACAAAAATGCTGAGTTGCAGCGCCT
TACCGGTATCTACAAGAACATTCTAATCAATGCTGGCATTACCTTAATTG
AAGGTCGTGGAAAGATTGTGGACCCACACACTGTTGATGTGGATGGGAAA
CTGTATTCAGCTAGGCACATACTGATTTCGGTTGGGGGACNGCCTTNCAT
TCCTGACATTCTGGCAGTGAATATGCAATAGATTCTGATGCTGCCCTTGA
TTTGCCCTCGAAAGCTGAGAAAATTGCATTNGTTGTGGTGGNAACATTGC
CTNGNAATTGCTGGCATCT
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