EY659296

Overview
NameEY659296
Unique NameEY659296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:114..1011. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 53/189 (28.04%), Postives = 75/189 (39.68%), Query Frame = 2
Query:  125 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV--IMTYASKYH---DGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMG 637
            + +V  K+   G+C +D H I   +   ++P++ GHE  G+V  +G  VSKFK GDKV +   +  C  C  C     N C K+  I T  S      DGT  +               +S+  V  E  + +I   APLD    + C   T Y         +PG              AV   KA G
Sbjct:   33 DHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKV-IPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAG 220          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 56/183 (30.60%), Postives = 76/183 (41.53%), Query Frame = 2
Query:  131 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGT--ITY-----------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMG 637
            +V  K+   GIC SD H++        +PI+ GHE  GVV  VG  V+  K GDKV +   +  C  C+SC     N C K  +  +    +DGT   TY           G +++  VA E  VV+I   APL+    + C   T Y         +PG              AV   KA G
Sbjct:   35 EVRIKILASGICRSDDHVLSGAL-KVNFPIILGHEAAGVVESVGEGVTSMKPGDKV-IPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAG 215          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: DHSO_SCHPO (Putative sorbitol dehydrogenase OS=Schizosaccharomyces pombe GN=tms1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11
Identity = 65/217 (29.95%), Postives = 92/217 (42.40%), Query Frame = 2
Query:  119 TGEKDVTFKVTHCGICHSDLHLIKNEW-GNAIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVGV--GCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTI-TYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMG-VKVTVISTSPSKRVKPLNVLALIPFWSVVIKMRCRLP 748
            T +  V   +   GIC SD+H  K    G+ I   P++ GHE  GVV EVG  VS  K GD V V  GC+   CR CD C     N CP +    A+  +DGT+ TY       +  E F  ++P+   ++  A      + V++  R  G  K G               +  AKA G + +  +  SPS+       +   PF  +  K    LP
Sbjct:   27 TDDHQVKVAIKATGICGSDVHYWKEGGIGDFILKKPMILGHESAGVVVEVGKGVSSLKPGDPVAVEPGCV---CRLCDYCRSGRYNLCPHMEFA-ATPPYDGTLRTY------YITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTR--GNLKCGSRVLVMGCGTVGLLMMAVAKAYGAIDIVAVDASPSRVEFAQKYVGAKPFTPIAAKENESLP 231          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11
Identity = 46/151 (30.46%), Postives = 67/151 (44.37%), Query Frame = 2
Query:  131 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASK-----------------YHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 532
            +V  K+T  G+CH+D   +       ++P+V GHE  G+V  VG  V+ FK GD V +   +  C  C  C     N C K+ +T  +                  +  GT T+  Y  T+VAD   + +I E APL+    L C   T Y
Sbjct:   37 EVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHV-IALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEY--TVVADIS-LTKINEKAPLEKVCLLGCGISTGY 183          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  131 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--------ASKYH-DGTITY-----GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 532
            +V  K+   GICH+D + +       ++P V GHE  G+V  VG  V+KFK GD V +   V  C  C  C     N C K+ +T          S++  +G + +       +S+  V  E  + ++ E APLD    L CA  T Y
Sbjct:   35 EVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAV-IPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGY 181          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 532
            K+V  K+   GIC +D H+IK    +  +P++ GHE VGVV  VG  V+  + GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V ++   AP +    + C   T Y
Sbjct:   35 KEVRVKILATGICRTDDHIIKGSMVSK-FPVIVGHEAVGVVESVGEGVTTVRPGDKV-IPLFLPQCRECNACLNPEGNLCIRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGY 180          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 53/203 (26.11%), Postives = 82/203 (40.39%), Query Frame = 2
Query:  128 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGT-------------ITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMG-VKVTVISTSPSKRVKPLNV 694
            K+V  K+   GIC +D+  + N+      PI+ GHE  G+V  VG  VS  K GDKV + C+   C  C++C     N C +V ++      +G              IT G +S+ +V  E  V ++ E A L+    + C   T +          PG               +   KA G  ++  + T+  K  K   V
Sbjct:   35 KEVRVKMVAAGICGTDIKSLDNKKLAPFCPIIMGHEGTGIVESVGEGVSTVKTGDKVIILCL-PQCGECNTCLNSKNNICKEVRLSGTHLTSEGNSRITCKGKTTYQYITTGTFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAKVSPGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDTNKDKFAKAKTV 236          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: TDH_MARMS (L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=tdh PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 52/183 (28.42%), Postives = 80/183 (43.72%), Query Frame = 2
Query:  122 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIYPI--VPGHEIVGVVTEVGSKVSKFKVGDKV-GVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMGVKVTVIS 658
            G  DV  K++   IC +D+H+ + ++W     P+    GHE VGV+TEVG +VS FK+GD+V G G +  +C  C +C     + C K +         G    G +++ +V       +IP     D  A     G   ++ L F   D  G              A   AK +G +  VI+
Sbjct:   24 GHNDVVIKISKTAICGTDMHIYQWDDWAQNTIPVPMTVGHEFVGVITEVGPEVSGFKIGDRVSGEGHI--TCGHCRNCRAGRRHLCRKTLGV-------GVNRTGAFAEYLVIPASNAFKIPNNISDDMAAIFDPFGNATHTALSF---DLIGEDVLITGAGPIGAMAAAIAKHVGARNVVIT 194          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 55/203 (27.09%), Postives = 83/203 (40.89%), Query Frame = 2
Query:  128 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMGV-KVTVISTSPSKRVKPLNV 694
            K+V  K+   GIC +D H+IK    +  +P++ GHE VG+V  VG +V+  + GDKV +   +  CR C+ C     N C +  +T      DGT  +               +++  V DE  V +I   AP +    + C   T Y          PG               V   KA G  ++  I  +  K  K L+V
Sbjct:   35 KEVRVKILATGICGTDDHVIKGTMVSK-FPVIVGHEAVGIVESVGEEVTTVRPGDKV-IPLFLPQCRECNPCRNPEGNLCIRSDLTGRGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDINKDKFQKALDV 235          
The following BLAST results are available for this feature:
BLAST of EY659296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
ADH4_STRCA1.494e-1128.04Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_UROHA1.952e-1130.60Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
DHSO_SCHPO3.329e-1129.95Putative sorbitol dehydrogenase OS=Schizosaccharom... [more]
ADHX_DROME3.329e-1130.46Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHL_GADMO5.678e-1131.08Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH7_MOUSE5.678e-1129.73Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH6_PERMA5.678e-1126.11Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]
TDH_MARMS9.685e-1128.42L-threonine 3-dehydrogenase OS=Marinomonas sp. (st... [more]
ADH7_RAT9.685e-1127.09Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659296 ID=EY659296; Name=EY659296; organism=Citrus sinensis; type=EST; length=897bp
ATTAAATTCATTCTGAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGA
ACGCCTTTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTT
CACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAAC
TCACTGTGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGG
GCAATGCCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTG
ACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGG
AGTAGGATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTG
ATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTAC
CATGATGGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGA
TGAGCACTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTG
CCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTAT
GGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCT
ANGCCATGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTG
TGATCAGTACCTCCCCTAGCAAGAGAGTGAAGCCGTTGAACGTCTTGGCG
CTGATTCCTTTTTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATG
GGGCACATGGATGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAAT
GCCGTTGATGGNACTGGTGAAATCTCAAGGAAGCTTGTACTTNCTGGTGC
ACCCGAGAAGCACTANAGCTACCAGCTTCCCCCTGCTCACGGGNAGA
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