EY659296

Overview
NameEY659296
Unique NameEY659296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:114..1011. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.108e-17
Identity = 51/188 (27.13%), Postives = 86/188 (45.74%), Query Frame = 2
Query:  113 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAK-AMGVKVTVISTSPSK 673
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG              A+++AK  MG K+     +  K
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDK 198          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH1_CAEEL (Alcohol dehydrogenase 1 OS=Caenorhabditis elegans GN=sodh-1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  125 EKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMGVKVTVI 655
            + ++  K+ + GICHSDLH+   +  + ++ P+V GHE  G V ++G  V+ +++GDK GV  M  +C +C+ C    E  C   I  Y     D + T+  Y      D     +I +   L A AP+LCAG+TVY  L+   +    +             A+++A AMG++V  +
Sbjct:   33 DDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHH-IQNYG---FDRSGTFQEYLTIRGVD---AAKINKDTNLAAAAPILCAGVTVYKALKESNVAPGQIIVLTGAGGGLGSLAIQYACAMGMRVVAM 203          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADHP_ECOLI (Alcohol dehydrogenase, propanol-preferring OS=Escherichia coli (strain K12) GN=adhP PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 50/185 (27.03%), Postives = 84/185 (45.41%), Query Frame = 2
Query:  113 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAK-AMGVKVTVISTS 664
            R+    +   K+  CG+CH+DLH+   ++G+    ++ GHE +GVV EVG  V+  K GD+  V      C  C+ C    E  C  V        + G    GG ++  +    + V++P+G    A + + CAG+T Y  ++   + +PG              A+++AK     KV  I  +
Sbjct:   20 RSLKHGEALLKMECCGVCHTDLHVKNGDFGDKT-GVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSV-------KNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKI-RPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVN 195          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADHA_MYCTU (Probable alcohol dehydrogenase adhA OS=Mycobacterium tuberculosis GN=adhA PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 49/134 (36.57%), Postives = 67/134 (50.00%), Query Frame = 2
Query:  155 CGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS-----KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPL 541
            CG+C +DLH+ + +       ++PGHE+VG V EVGS V      +F  GD+VG+  +  +C  C  C    EN CP+      S+Y  G    GGY++       F   +P G      APLLCAGI  Y  L
Sbjct:   48 CGVCRTDLHVTEGDLPVHRERVIPGHEVVGEVIEVGSAVGAAAGGEFDRGDRVGIAWLRHTCGVCKYCRRGSENLCPQ------SRY-TGWDADGGYAEFTTVPAAFAHHLPSGYSDSELAPLLCAGIIGYRSL 174          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 46/179 (25.70%), Postives = 81/179 (45.25%), Query Frame = 2
Query:  131 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAK-AMGVKVTVISTS 664
            +   ++ +CG+CH+DLH+   ++G+    I  GHE +G+V +VG  V+  KVGD+  V      C  C+ C    E  C  V        + G    G  ++  +    + V++P+G      + + CAG+T Y  ++   + +PG              A+++AK     KV  I  +
Sbjct:   26 EALLEMEYCGVCHTDLHVKNGDFGDETGRIT-GHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNV-------ENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVKVSQI-QPGQWLAIYGLGGLGNLALQYAKNVFNAKVIAIDVN 195          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.201e-14
Identity = 62/222 (27.93%), Postives = 97/222 (43.69%), Query Frame = 2
Query:  125 EKDVTFKVTHCGICHSDLHLIKN------------EWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC--------------RSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKRVKPLNVLALIPF 712
            + +V   V+ CGIC SDLH   +            +  NA  P+  GHE+ G+V++VG KV+K KVGD V V     SC              + CD+C    EN C     T+A     G I+ GG+++ +V  +H ++ +P+  PLD  A +    +T +  ++  G  K G               +   K MG    V+S    +R++    L +  F
Sbjct:   26 DDEVIIDVSWCGICGSDLHEYLDGPIFMPKDGECHKLSNAALPLAMGHEMSGIVSKVGPKVTKVKVGDHVVVDA-ASSCADLHCWPHSKFYNSKPCDACQRGSENLC-----THAGFVGLGVIS-GGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVT-WHAVKISGF-KKGSSALVLGAGPIGLCTILVLKGMGASKIVVSEIAERRIEMAKKLGVEVF 238          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.723e-13
Identity = 57/180 (31.67%), Postives = 78/180 (43.33%), Query Frame = 2
Query:  122 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI------YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYASKYHDGTITYGGYSD-TMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXAVKFAKAM 634
            G   V  KV + G+CH+DL +      N I       P+V GHEI G V E+G  V  FK  DKV +   +G   SC  C I  + YC  PK +         G    GGY +  +V D  ++ ++         +PL C+G+T Y  LR   LD                 AV+ AKA+
Sbjct:   24 GVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGD-GSCHYCKIGEDQYCDNPKWL---------GINVNGGYGEYVLVPDYRYMFKL-RNLSTSTASPLACSGVTAYRALRLANLDPSKSVMIIGAGGGLGSIAVQIAKAI 192          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13
Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = 2
Query:  131 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK--------VIMTYASKYH------DGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPG 568
            +V  K+   GIC SD H+I     +  +P++ GHE  GVV  VG  V+KFK GDKV +   V  C  C  C     N C K        V++   S++          I+   +++  V DE  V +I E APL+    + C   T Y      G  KPG
Sbjct:   35 EVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKV-IPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLLDKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPG 193          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 44/148 (29.73%), Postives = 69/148 (46.62%), Query Frame = 2
Query:  128 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGT-------------ITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 532
            K+V  K+   G+C +D+  +  +  +   P++ GHE VG+V  VG  VS  + GDKV + C +  C  C +C     N C ++ ++      +GT             I  G +S+  V  E  V +I EGAPL+    + C   T Y
Sbjct:   35 KEVRIKMVATGVCGTDIKHLDTQELSKFCPMIMGHEGVGIVESVGEGVSSVRTGDKVILLC-IPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGY 181          
BLAST of EY659296 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 47/160 (29.38%), Postives = 72/160 (45.00%), Query Frame = 2
Query:  128 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPG 568
            K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V +I + AP +    + C   T Y      G  KPG
Sbjct:   35 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 192          
The following BLAST results are available for this feature:
BLAST of EY659296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
ADH_STAA33.108e-1727.13Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH1_CAEEL1.000e-1530.34Alcohol dehydrogenase 1 OS=Caenorhabditis elegans ... [more]
ADHP_ECOLI1.306e-1527.03Alcohol dehydrogenase, propanol-preferring OS=Esch... [more]
ADHA_MYCTU2.909e-1536.57Probable alcohol dehydrogenase adhA OS=Mycobacteri... [more]
ADH1_ZYMMO3.217e-1425.70Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
BDH1_YEAST4.201e-1427.93(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
ADH_SULAC2.723e-1331.67NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH1_RANPE4.645e-1332.50Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH6_RAT3.932e-1229.73Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH7_HUMAN6.707e-1229.38Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659296 ID=EY659296; Name=EY659296; organism=Citrus sinensis; type=EST; length=897bp
ATTAAATTCATTCTGAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGA
ACGCCTTTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTT
CACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAAC
TCACTGTGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGG
GCAATGCCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTG
ACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGG
AGTAGGATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTG
ATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTAC
CATGATGGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGA
TGAGCACTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTG
CCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTAT
GGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCT
ANGCCATGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTG
TGATCAGTACCTCCCCTAGCAAGAGAGTGAAGCCGTTGAACGTCTTGGCG
CTGATTCCTTTTTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATG
GGGCACATGGATGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAAT
GCCGTTGATGGNACTGGTGAAATCTCAAGGAAGCTTGTACTTNCTGGTGC
ACCCGAGAAGCACTANAGCTACCAGCTTCCCCCTGCTCACGGGNAGA
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