EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_NITWN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=sucC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.077e-41 Identity = 76/192 (39.58%), Postives = 109/192 (56.77%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G FK +G KGGV + + +EV+ +G+MLG LVT QTGP GK V+++Y+ E + E YF+ ++DR+T+ + ++GG +IE++A K P IV +D G+ V L + A + V +LY F D +LEINPL T +L DAK++FD NA +R Sbjct: 44 VVKSQIHAGGRGKGKFKEASAGEKGGVRLARSIDEVKTFAGQMLGATLVTAQTGPAGKQVNRLYIEEGSDIDKEFYFSALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPATGVMSHHGRTVARALRLRGDLGKQAEKLVTQLYDAFIARDMAMLEINPLVVTKQGELRVLDAKISFDSNALYR 235 HSP 2 Score: 60.4622 bits (145), Expect = 7.077e-41 Identity = 26/49 (53.06%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVGLLP 765 +++D + + A + D++Y+ LDG+IGCMVNGAGLA+ATMDI K + G+ P Sbjct: 246 SEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIK-LYGMAP 293
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_DIAST (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Diaphorobacter sp. (strain TPSY) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.079e-41 Identity = 76/189 (40.21%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K ++V+ + ++LG LVT QTGP+G+ V ++Y+ + + NE+Y +++ DR T +I S+GG IE++A P I+ ID GIT E + KV + A + A++ KLYK + ++D +L+EINPL S L+A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKTIDDVKARASEILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYVSLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITPEQSKKVAAAIGLTGASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFR 225 HSP 2 Score: 58.5362 bits (140), Expect = 7.079e-41 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP V A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ACISJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidovorax sp. (strain JS42) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.079e-41 Identity = 76/189 (40.21%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K ++V+ + ++LG LVT QTGP+G+ V ++Y+ + + NE+Y +++ DR T +I S+GG IE++A P I+ ID GIT E + KV + A + A++ KLYK + ++D +L+EINPL S L+A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKTIDDVKARASEILGMQLVTHQTGPEGQKVRRLYIEDGADIKNELYVSLVTDRGTQKVALIASSEGGMDIEEVAHSTPEKIITEMIDPLTGITPEQSKKVAAAIGLTGASVDQAVDLFAKLYKCYMDTDASLVEINPLNCDSKGNLMALDAKFNFDANALFR 225 HSP 2 Score: 58.5362 bits (140), Expect = 7.079e-41 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP V A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium chlorochromatii (strain CaD3) GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.902e-41 Identity = 72/195 (36.92%), Postives = 113/195 (57.95%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYL 605 +VV QI AGGRG GGV + K EE +++ +M+G L+T QTGP+GK+VS++ + E + + E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ ID G+ A + L + +A+ + LYK + D ++ EINPL TS +++A DAK+NFDDNA +R Y+ Sbjct: 47 VVVKAQIHAGGRGKA-------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEKEFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGMQGFQAREAAFFLGLEGEQFRNAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIALDAKINFDDNALYRHKEYM 234 HSP 2 Score: 58.5362 bits (140), Expect = 7.902e-41 Identity = 25/46 (54.35%), Postives = 35/46 (76.09%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 +++DP V A K+++NY+ LDG +GCMVNGAGLA+ TMDI + G Sbjct: 240 SEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGG 285 HSP 3 Score: 21.557 bits (44), Expect = 7.902e-41 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 2 Query: 776 VGGNASEGQVXGGFKL*LS 832 VGG AS V GFK+ LS Sbjct: 293 VGGTASPQTVEEGFKIILS 311
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus GN=sucC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 9.220e-41 Identity = 73/192 (38.02%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G F+ KGGV +VK EEV + +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LEINPL T+ L DAKL+FD N+ FR Sbjct: 44 VVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFR 235 HSP 2 Score: 63.929 bits (154), Expect = 9.220e-41 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++DP+ + A K D+ YI LDGEIGCMVNGAGLA+ATMDI K Sbjct: 246 SEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=sucC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 9.220e-41 Identity = 73/192 (38.02%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G F+ KGGV +VK EEV + +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LEINPL T+ L DAKL+FD N+ FR Sbjct: 44 VVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFR 235 HSP 2 Score: 63.929 bits (154), Expect = 9.220e-41 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++DP+ + A K D+ YI LDGEIGCMVNGAGLA+ATMDI K Sbjct: 246 SEEDPKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BURPP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=sucC PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.223e-41 Identity = 72/189 (38.10%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K ++V + S ++LG LVT QTGP+G+ V+++ + E + E+Y +++DR + +++ S+GG +E++AEK P +I K+ +D G+ D +A ++ + A A ++ LYK F E+D +L EINPL T +++A DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSLDQVREYSEQILGMQLVTHQTGPEGQKVNRLLIEEGADIKKELYVGLVIDRVSQKIVVMASSEGGMDVEEVAEKTPELIHKIAVDPATGLKDAEADELATKIGVPAASLPQARAILQGLYKAFWETDASLAEINPLILTGDGKVIALDAKFNFDSNALFR 225 HSP 2 Score: 58.5362 bits (140), Expect = 9.223e-41 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP V A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PELUB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelagibacter ubique GN=sucC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 9.224e-41 Identity = 70/192 (36.46%), Postives = 113/192 (58.85%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 ++ V+ QI AGGRG GGV I+ +E+ + ++LG+ LVT QTGP G+ V ++Y+ E ++ E Y + ++DR ++ + I +GG IE++AEK P I+ ID+ + I+D D K++ A + AI +K +YK+F +D ++E+NPL T K+++ DAK+NFD NA FR Sbjct: 41 EKFVLKAQIHAGGRGKA-------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALADDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFR 225 HSP 2 Score: 59.3066 bits (142), Expect = 9.224e-41 Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 ++DP + A K D+ YI LDG IGCMVNGAGLA+ATMDI K Sbjct: 237 EEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIK 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PHEZH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Phenylobacterium zucineum (strain HLK1) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.201e-40 Identity = 72/192 (37.50%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G F+ KGGV +VK +EV+ + +MLG++LVT QTG GK V+++Y+ E + E Y ++++DR+T+ ++ ++GG IE++A P IV ID G+ + L +A + +LY F D ++LEINPL T L DAK++FD NA FR Sbjct: 44 VVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQVNRLYIEEGAQIAKEFYLSLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPATGVFPHHGRHLAKALGLTGGLAKEAATLLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFR 235 HSP 2 Score: 65.0846 bits (157), Expect = 1.201e-40 Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 +++DP+ + A K D++YI LDGEIGCMVNGAGLA+ATMDI K Sbjct: 246 SEEDPKEIEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIK 287
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BURM1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=sucC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.566e-40 Identity = 78/193 (40.41%), Postives = 116/193 (60.10%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV QI AGGRG G GGV + K E+V + + ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++VA DAK NFD NA FR Sbjct: 44 VVKAQIHAGGRGKG-------GGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQA----DDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFR 225 HSP 2 Score: 58.151 bits (139), Expect = 1.566e-40 Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 1 Query: 622 QDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DP + A K D+ YI LDG IGC+VNGAGLA+ATMD K G Sbjct: 237 EEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGG 281 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |