EY659217

Overview
NameEY659217
Unique NameEY659217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig185 contig Csv1_Contig185:207..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35
Identity = 88/234 (37.61%), Postives = 126/234 (53.85%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRY-KVPPFEC 737
            +GSGF S   YL G     IKL    +AG V  FY+ S G  +    DEIDFEFLGN+ G  + + TN+Y  G     +E++++LWFDP+ +FH YSILW   +II  +D  PIREFK   S+G  FP  KPM +YA++W+  DWAT GG  + ++  AP++  + +                K D   +S        S SQ  +++   + +M Y+YC D  R+ +  P EC
Sbjct:   54 SGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTW----DEIDFEFLGNMSGDPYTLHTNVYTQGKGD--KEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNI---------------KIDSKPNSNWYTQEMDSTSQ-ARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.101e-25
Identity = 71/232 (30.60%), Postives = 118/232 (50.86%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFXRKHMTYSYCYDQIRYKVPPFEC 737
            +GSGF S  +Y  G+F+  IK P   + GV+ +FY+ +       HDE+ F+ LG   G  + + TN+Y  G    G+++R+ LWFDP+ D+H YS LW  +Q++FY+D  PIR + +   +   +P+ + M L  ++ +GS          ++ K  PY+ +F    + GC  +       KC  T+         +S  ++    N  + ++ Y YC D+ RY   P EC
Sbjct:   53 SGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRS---SRHDELCFQILGK-NGPPYLLNTNMYLYGEG--GKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDV--YYPSVQTMFLMGSVQNGS---------IIDPKQMPYIAKFQASKIEGCKTE--FMGIDKC--TDPKFWWNRKQLSSKEKTLYLNARKTYLDYDYCSDRQRYPKVPQEC 263          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: CRH1_YEAST (Probable glycosidase CRH1 OS=Saccharomyces cerevisiae GN=CRH1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 3
Query:  108 LPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSD---------WATNGGKYRVNYKYAPY 521
            L A    G+V +FY+ + D+     DEID E++G   G N + Q+N +  G T+      ++    P+D FH Y++ W   +  +Y+DG  +R    T+S G  +P  PM L   IW G D         WA  GG+   NY  AP+
Sbjct:  113 LKAANGTGIVSSFYLQSDDL-----DEIDIEWVG---GDNTQFQSNFFSKGDTTTYDRGEFHGVDTPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSSEG--YPQSPMYLMMGIWAGGDPDNAAGTIEWA--GGE--TNYNDAPF 245          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 54/156 (34.62%), Postives = 76/156 (48.72%), Query Frame = 3
Query:   63 SHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGS---DWATNGGKYRVNYKYAPY 521
            S ++Y +G +  S+K PA  T G+V +F+   G       DEID EFLG    K   +Q N Y NG    G E+  +L FD S  FH Y+  W    I +Y+DG+     K TA+   + P+ P  +   +W+G+   DW   G     N  YA Y
Sbjct:   89 STNIYGYGLYEVSMK-PAKNT-GIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTAT--ANIPSTPGKIMMNLWNGTGVDDWL--GSYNGANPLYAEY 229          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 3
Query:   75 YLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYR-VNYKYAPY 521
            Y +G +  S+K PA  T G+V +F+   G       DEID EFLG    K   +Q N Y NG    G E+  NL FD S  FH Y+  W    I +Y+DG+     K TA+   + P+ P  +   +W+G+   +  G Y   N  YA Y
Sbjct:   94 YGYGLYEVSMK-PAKNT-GIVSSFFTYTGPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGV----LKHTATT--NIPSTPGKIMMNLWNGTGVDSWLGSYNGANPLYAEY 230          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG---SDW--ATNG 485
            +G  F +++ Y +G++  S++  A    GVV +F+   G   +   DEID E LG       ++Q N Y NG      E+ Y+L FD S+ +H Y   W  + I +Y+DG   RE  R      D P  P  +    W G    DW  A NG
Sbjct:  635 SGGEFRTNNFYHYGYYECSMQ--AMKNDGVVSSFFTYTGPSDDNPWDEIDIEILGK---NTTQVQFNYYTNGQGK--HEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDG---REVYRATQ---DIPKTPGKIMMNAWPGLTVDDWLKAFNG 773          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 48/155 (30.97%), Postives = 66/155 (42.58%), Query Frame = 3
Query:   84 GFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG---SDWATNGGKY------RVNYKYAPY 521
            G+    +++ A    G+V +F+   G       DEID EFLG    K   +Q N Y NG    G E  +NL FD S DFH Y   W    I FY+DG  +    R      + P  P  +   +W G    +W    G+Y      +  Y+Y  Y
Sbjct:  102 GYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGKDTTK---VQFNWYKNGVG--GNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTR------NIPVTPGKIMMNLWPGIGVDEWL---GRYDGRTPLQAEYEYVKY 242          
BLAST of EY659217 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 52/179 (29.05%), Postives = 77/179 (43.02%), Query Frame = 3
Query:   45 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKR-----TASMGGDFPAKPMSLYATIWDGSDWATNGGKYR-----VNYKYAPYVTEFSDFVLH 551
            TGS   S   +L+G   AS+++    + GVV AF     D+     DEIDFE+LG   G     Q+N Y  G     R +R+ +  D    +H Y I W   +II+Y+DG   R   +       S    +P  PM L   +W G       G        ++++ +P + E   F  H
Sbjct:  177 TGSLITSTRSFLYG--KASVRMKTARSRGVVTAF-----DLTSAIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVDGKIARTVLKKDTWDPISKEYRYPQTPMRLEIAVWPGGSETNGPGTINWAGGLIDWENSPDIIEKGQFTAH 345          
The following BLAST results are available for this feature:
BLAST of EY659217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
XTH24_ARATH5.639e-3537.61Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH11_ARATH3.101e-2530.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
CRH1_YEAST3.011e-1232.65Probable glycosidase CRH1 OS=Saccharomyces cerevis... [more]
GUB_PAEMA5.136e-1234.62Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2[more]
GUB_PAEPO6.707e-1235.33Beta-glucanase OS=Paenibacillus polymyxa GN=gluB P... [more]
XYND_RUMFL5.678e-1132.24Xylanase/beta-glucanase OS=Ruminococcus flavefacie... [more]
GUB_CLOTH7.416e-1130.97Beta-glucanase OS=Clostridium thermocellum (strain... [more]
CRR1_YEAST9.685e-1129.05Probable glycosidase CRR1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659217 ID=EY659217; Name=EY659217; organism=Citrus sinensis; type=EST; length=898bp
GTTCATAGAGATGGAAAATCTGTTCATTTATCTCTAGATGAAAGACAGGG
TCTGGATTTGTGTCACATGACCTCTATCTTCATGGTTTCTTCAGTGCTTC
AATAAAGTTGCCTGCTGATTATACTGCCGGCGTTGTTGTTGCCTTCTATA
TGTCAAATGGTGACATGTTTGAGAAGAATCATGATGAAATAGACTTTGAG
TTCTTGGGTAATATTAGAGGCAAAAATTGGAGGATTCAGACTAATATTTA
TGGCAATGGAAGCACCAGCATCGGAAGAGAAGAGAGATACAATCTCTGGT
TTGATCCTTCTGATGATTTCCATCAGTACAGTATTCTCTGGACTGATTCC
CAGATCATATTTTATATAGACGGTATTCCAATTAGGGAGTTTAAGAGAAC
TGCATCTATGGGAGGAGATTTTCCTGCTAAGCCGATGTCTTTGTACGCCA
CAATCTGGGATGGCTCTGATTGGGCTACAAATGGTGGCAAATACCGAGTG
AACTACAAATATGCTCCCTATGTGACTGAATTCTCTGACTTCGTACTCCA
CGGATGTTCATTTGATCCTATTGAGCAAACTTCTTCCAAGTGTGACATAA
CCGAAAGTTCCAAAGTATCAATCCCTACTGGCGTCTCCCCATCACAGAGA
ATTAAAATGGAAAACTTTANGAGGAAGCATATGACCTATTCCTACTGCTA
TGACCAAATTCGATACAAAGTTCCTCCATTTGAGTGTGTGATCAACCCCC
TTGAGGCGGAGCGCCTTAAAGTACACGATCCAGTTACATTCNGGGGGAGG
GCGGCGCCATCACGGGAAACGACACCACCGAGCCGATCAAGCGAACCAAG
NNCAATGACGTTGAGGAGACTATATGCTACATGCAGACACTATTTGTC
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