EY659088

Overview
NameEY659088
Unique NameEY659088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7542 contig Csv1_Contig7542:17..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.926e-56
Identity = 107/205 (52.20%), Postives = 140/205 (68.29%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 611
            PG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP A++H Y I WN   I+F VD +PIR + N  S   PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF AYYR++++EGC  V G + C +N   W+     Q L +    R + V+  +M+Y+YC+DK R+P   PPEC
Sbjct:   78 PGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN-SQWFT----QKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.285e-56
Identity = 111/211 (52.61%), Postives = 142/211 (67.30%), Query Frame = 3
Query:   12 GDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCAS-----NPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 617
            G+SAGTVTA+Y+ S   +  DE+DFEFLGN +G PYT+ TN++  GKGDREQ+  LWFDP +D+H Y+ILWN   I+F VD  PIR +KN  S    FP NQPM +YS+LW A++WATRGGL K DWSKAPF A YR F+ E C V  G ++C +     + G+W      Q L +    + RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:   80 GNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLS----QELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPRECLA 285          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.558e-56
Identity = 111/204 (54.41%), Postives = 138/204 (67.65%), Query Frame = 3
Query:   12 GDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFD-IEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 611
            G+SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  ++H Y+I+W   HI+F VD+ PIRV+KN+     PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR+F  IE        +  SN G  +EAN    L A   RR RWV+   MIY+YC+D  R+P   P EC
Sbjct:   86 GNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEF----SSKSSISNSGAEYEANE---LDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.248e-55
Identity = 104/206 (50.49%), Postives = 138/206 (66.99%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGN---WWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 611
            P DSAG VTAFY+ S  +   DE+DFEFLGNR G+P  +QTN+++NG+G REQ+   WFDP   +H Y ILWN + IVFYVD VPIRV+KN  ++   +P ++PM + ++LW  ++WAT GG EKI+W+ APF A Y+ F   GC V G +N A+  G+   WW    Y  L+A E +    VR  +M YDYC+D+ RYPVPP EC
Sbjct:   85 PRDSAGVVTAFYLTSKGDT-HDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVPPSEC 288          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.781e-55
Identity = 104/205 (50.73%), Postives = 139/205 (67.80%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 611
            PG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KNS     PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR++++EGC    G ++C +N  +W+     Q L +    R + V+  +M+Y+YC DK R+P   P EC
Sbjct:   83 PGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPAN-SSWFT----QQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.092e-55
Identity = 104/205 (50.73%), Postives = 139/205 (67.80%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 611
            PG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KN      PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++GC    G ++C++N   W+     Q L +    R + V+  +MIY+YCTDK R+P   P EC
Sbjct:   83 PGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSCSAN-SPWFT----QKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.092e-55
Identity = 104/208 (50.00%), Postives = 141/208 (67.79%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 611
            PG+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A YR F D++ C      N   C +N  +W     +  L + +  + +WV+ ++MIY+YCTD  R+P   P EC
Sbjct:   80 PGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWNWVTCNANSNSWM----WTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54
Identity = 105/204 (51.47%), Postives = 134/204 (65.69%), Query Frame = 3
Query:    9 PGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 611
            PG+SAGTVT FY+ S   +  DE+DFEFLGN +G PYT+ TN+Y  GKGD+EQ+ +LWFDP A++H Y+ILWN   I+  VDD PIR +KN  S    FP N+PM +Y++LW ADDWATRGGL K DWSKAPF A YR+  I+  P            NW+     Q + +    R +WV+ N+MIY+YCTD  R+P   P EC
Sbjct:   77 PGNSAGTVTTFYLKSEG-STWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKP----------NSNWYT----QEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.380e-54
Identity = 105/207 (50.72%), Postives = 135/207 (65.22%), Query Frame = 3
Query:   12 GDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPA---NCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 611
            G+SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP AD+H YT+ WN  +I+F VD +PIRV+KN+ +    +P NQPM +YS+LWEADDWAT GG  KIDWS APF A YR+F D   C     +    C  N  +W     +  L   +  +  WV+ + MIY+YCTD  R+P   P EC
Sbjct:   84 GNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKWVTCEPNSNSWM----WTTLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKEC 285          
BLAST of EY659088 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.603e-53
Identity = 102/207 (49.28%), Postives = 140/207 (67.63%), Query Frame = 3
Query:   12 GDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 611
            G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A Y+ F D++ C      N   C +N  +W     +  L + +  + +WV+ ++MIY+YCTD  R+P   P EC
Sbjct:   80 GNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCCSRTSLLNWVTCNANSNSWM----WTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281          
The following BLAST results are available for this feature:
BLAST of EY659088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH19_ARATH1.926e-5652.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH3.285e-5652.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN9.558e-5654.41Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH2_ARATH1.248e-5550.49Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH18_ARATH2.781e-5550.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH8.092e-5550.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH8.092e-5550.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.057e-5451.47Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH1.380e-5450.72Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH2.603e-5349.28Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659088 ID=EY659088; Name=EY659088; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAAT
TCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAAA
CCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGAA
AAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAGAT
TATCACCTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATGT
GGATGATGTGCCCATCAGGGTTTACAAAAACAGTGGAAGGGCTCCATTTC
CAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGCAGATGAC
TGGGCAACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAGCTCCTTT
TTATGCTTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTTCCTGGAC
CAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAATAATTAT
CAAGCCCTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTCGTCTCAA
CCACATGATCTATGATTATTGCACTGATAAATCAAGATACCCAGTACCCC
CACCGGAATGCCTTGCCGGCATATAAATTCAACCCGCCAATTAAATTAGC
AGTTGGACGGTACTCCATATCCGTATCATATCATGTATATTACTTCACGT
ACACGTCCTTTGTATTATTCCCTATTCGTGTGAAAAGACTATACGCATAT
CAAGGGAGGGGCAGGAAGGAAAATAAACATTGTGGGCTTTAANTGTGGAT
ATGGGAGTGGGAAATATGGGGGATTCTGCTCCGCTGGACATATATAATCT
GATTTGATGCACAGATCTGTGCAATAANCC
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