EY675320

Overview
NameEY675320
Unique NameEY675320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.897e-31
Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 3
Query:   12 DVPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            ++PIR ++N+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A Y+ F I+GC     A  CA+    WW+   ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  169 NIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30
Identity = 60/124 (48.39%), Postives = 80/124 (64.52%), Query Frame = 3
Query:   15 VPIRVYQNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC--PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            VPIRVY+NS + P    FP  +PM ++S++W ADDWATRGGLEK DW KAPF + Y+DF +EGC    P PA  ++   NWW+  +   L+  +   Y WV+ N ++YDYC D  R+P  P EC
Sbjct:  163 VPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.328e-29
Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = 3
Query:   12 DVPIRVYQNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            ++PIRVY+N     +P ++PM V ++LW  DDWAT GG  K++WS +PF A++RDF + GC + G +N      +   WW A NYQ L+  E + Y  VR  +M YDYCTD+S+Y  PP EC
Sbjct:  169 NIPIRVYKNENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.165e-28
Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 3
Query:   12 DVPIRVYQNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP---ANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            + PIRV +N      PF  +Q MGVYS++W ADDWAT+GGL K DWS APF A Y++F I+ C +P     + C  +   WW+      L+  +  +  WVR NHMIYDYC D +R+PV P EC
Sbjct:  161 ETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 65/126 (51.59%), Postives = 79/126 (62.70%), Query Frame = 3
Query:   12 DVPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWW---EANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            +VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C V  G + C     + +   E+     L A   RR RWV+   MIYDYC+D  R+P   PPEC
Sbjct:  161 NVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   15 VPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 368
            +PIR ++NS     PFP +QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++ C    G ++C++N  +W+     Q L      R +W +  +M+Y+YCTDK R+P   PPEC
Sbjct:  165 IPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSCSAN-SSWFT----QVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.598e-26
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 3
Query:   15 VPIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 368
            +PIR + N  S   PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF AYYR++++EGC  V G + C +N   W+     Q L +    R + V+  +M+Y+YC+DK R+P   PPEC
Sbjct:  160 IPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN-SQWFT----QKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.507e-25
Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 3
Query:   12 DVPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFD-IEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            + PIRV++N+     PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR+F  IE        +  SN G  +EAN    L A   RR RWV+   MIY+YC+D  R+P   P EC
Sbjct:  166 NTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEF----SSKSSISNSGAEYEANE---LDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.275e-25
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 3
Query:   12 DVPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA---RRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            ++PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C     + C     + +     Q  T + A   RR RWV+   MIY+YC+D  R+P   PPEC
Sbjct:  162 NLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC--TASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPEC 284          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.295e-25
Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 3
Query:   15 VPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            +PIR+Y+N G     +P  QPM V ++LW  + WATRGG +KIDWSK PF A + D+ I+ C   G  +  +     NWW  N + +LT ++ R ++WVR  H+IYDYC D  R+    P EC
Sbjct:  172 IPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294          
The following BLAST results are available for this feature:
BLAST of EY675320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
XTH4_ARATH8.897e-3149.18Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH7.532e-3048.39Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH8.328e-2945.90Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH3.165e-2846.77Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH5.968e-2751.59Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH1.330e-2646.72Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH6.598e-2649.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN2.507e-2552.85Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH15_ARATH3.275e-2548.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH7.295e-2543.09Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675320 ID=EY675320; Name=EY675320; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGGATGTGCCCATCAGGGTTTACCAAAACAGTGGAAGGGCT
CCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGC
AGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAG
CTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTT
CCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAA
TAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTC
GTCTCAACCACATGATCTATGATTATTGCACTGATAAATCAAGATACCCA
GTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACCCGCCAATTA
ATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCATGTATATTAC
TTCACGTACACGTCCCTTTGTATTATTCCCTATTCTTGTGAAAAAGACTT
ATACGCATATCAAGGGAGGGGGCGGAGGGAAAAAATAAAACATTGGTGGG
CTTTTAATTGTGATTATGGGAGTGGGAAATATGTGGGTATTCCTGGCTCC
CTTGGTACCCATATATAAGTCCGAAATTTGAAGCCCAGTATTCTGTGCCA
ATAAGAGCCCTCCTTTCTTATTGTGGGAAAAAAATAAATATAAAAAAGAA
TAAAAAGAGAAGAAGAAGTTCATATTGCACAATTGAAAATGAGATAAAAG
TTATGATATGAAACGTATTTGGATTGATGAGTATAAGGGGGGGGCGCCCT
CTGAAGGGAATCAGTTCTTAGTGCCCGGGCGGCGGGGAAGTCATACCTCT
CTTATAATGGTGCCAAAAAATTTATTTCTCGGGGCGCGGTTTTTAACCCA
GTATGGGGGGGAGAAAAACCCTGCGTGCTCAC
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