EY675320

Overview
NameEY675320
Unique NameEY675320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25
Identity = 62/129 (48.06%), Postives = 76/129 (58.91%), Query Frame = 3
Query:   18 PIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 374
            PIR ++N  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A YR F  E C         P  +   +  G+W      Q L +   +R RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:  159 PIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSWLS----QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECLA 283          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 3
Query:   15 VPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 368
            +PIR ++NS     PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR++++EGC    G ++C +N  +W+     Q L +    R + V+  +M+Y+YC DK R+P   P EC
Sbjct:  165 IPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPAN-SSWFT----QQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 3
Query:   15 VPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 368
            +PIR ++N      PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++GC    G ++C++N   W+     Q L +    R + V+  +MIY+YCTDK R+P   P EC
Sbjct:  165 IPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSCSAN-SPWFT----QKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.621e-24
Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 3
Query:   15 VPIRVYQNSGRAP--FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGN---WWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            VPIRV++N  ++   +P ++PM + ++LW  ++WAT GG EKI+W+ APF A Y+ F   GC V G +N A+  G+   WW    Y  L+A E +    VR  +M YDYC+D+ RYPVPP EC
Sbjct:  167 VPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVPPSEC 288          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.621e-24
Identity = 62/128 (48.44%), Postives = 80/128 (62.50%), Query Frame = 3
Query:   18 PIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCAS-----NPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 374
            PIR ++N  S    FP NQPM +YS+LW A++WATRGGL K DWSKAPF A YR F+ E C V  G ++C +     + G+W      Q L +    + RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:  162 PIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLS----QELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPRECLA 285          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.987e-22
Identity = 57/125 (45.60%), Postives = 73/125 (58.40%), Query Frame = 3
Query:    3 TRPDVPIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 368
            T  D PIR ++N  S    FP N+PM +Y++LW ADDWATRGGL K DWSKAPF A YR+  I+  P            NW+     Q + +    R +WV+ N+MIY+YCTD  R+P   P EC
Sbjct:  155 TVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKP----------NSNWYT----QEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.860e-22
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   15 VPIRVYQNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPA---NCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            +PIRV++N+ +    +P NQPM +YS+LWEADDWAT GG  KIDWS APF A YR+F D   C     +    C  N  +W     +  L   +  +  WV+ + MIY+YCTD  R+P   P EC
Sbjct:  165 IPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKWVTCEPNSNSWM----WTTLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKEC 285          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.288e-21
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   12 DVPIRVYQN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 368
            ++P+RV++N  S    +P ++PM V  +LW  ++WAT GG  KI+WS APF A ++ F+  GC      N   +   WW   +Y  L+  E + Y  VR  +M YDYC+DK R+ VPP EC
Sbjct:  172 NIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 291          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.682e-21
Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 3
Query:   15 VPIRVYQNS--GRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            +PIRV++N+      +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A YR F D++ C      N   C +N  +W     +  L + +  + +WV+ ++MIY+YCTD  R+P   P EC
Sbjct:  162 IPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWNWVTCNANSNSWM----WTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282          
BLAST of EY675320 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.893e-21
Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 3
Query:   15 VPIRVYQNS--GRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 368
            +PIRV++N+      +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A Y+ F D++ C      N   C +N  +W     +  L + +  + +WV+ ++MIY+YCTD  R+P   P EC
Sbjct:  161 IPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCCSRTSLLNWVTCNANSNSWM----WTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281          
The following BLAST results are available for this feature:
BLAST of EY675320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
XTH22_ARATH9.528e-2548.06Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH18_ARATH1.625e-2446.72Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH2.772e-2446.72Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH3.621e-2444.72Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH3.621e-2448.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.987e-2245.60Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH9.860e-2244.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH1.288e-2140.50Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.682e-2142.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH4.893e-2141.60Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675320 ID=EY675320; Name=EY675320; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGGATGTGCCCATCAGGGTTTACCAAAACAGTGGAAGGGCT
CCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGC
AGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAG
CTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTT
CCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAA
TAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTC
GTCTCAACCACATGATCTATGATTATTGCACTGATAAATCAAGATACCCA
GTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACCCGCCAATTA
ATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCATGTATATTAC
TTCACGTACACGTCCCTTTGTATTATTCCCTATTCTTGTGAAAAAGACTT
ATACGCATATCAAGGGAGGGGGCGGAGGGAAAAAATAAAACATTGGTGGG
CTTTTAATTGTGATTATGGGAGTGGGAAATATGTGGGTATTCCTGGCTCC
CTTGGTACCCATATATAAGTCCGAAATTTGAAGCCCAGTATTCTGTGCCA
ATAAGAGCCCTCCTTTCTTATTGTGGGAAAAAAATAAATATAAAAAAGAA
TAAAAAGAGAAGAAGAAGTTCATATTGCACAATTGAAAATGAGATAAAAG
TTATGATATGAAACGTATTTGGATTGATGAGTATAAGGGGGGGGCGCCCT
CTGAAGGGAATCAGTTCTTAGTGCCCGGGCGGCGGGGAAGTCATACCTCT
CTTATAATGGTGCCAAAAAATTTATTTCTCGGGGCGCGGTTTTTAACCCA
GTATGGGGGGGAGAAAAACCCTGCGTGCTCAC
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