EY674756

Overview
NameEY674756
Unique NameEY674756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.874e-53
Identity = 104/139 (74.82%), Postives = 112/139 (80.58%), Query Frame = 3
Query:  102 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            GKAV L PS  E+   GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 149          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.447e-53
Identity = 103/143 (72.03%), Postives = 117/143 (81.82%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAVN+ PS ++++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF  +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 152          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.196e-53
Identity = 102/143 (71.33%), Postives = 114/143 (79.72%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 153          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 7.119e-53
Identity = 101/143 (70.63%), Postives = 114/143 (79.72%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAV L+ S +E++  G+++MRKT +K+   SS SPWYGPDRVKYLGPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF  +      +AVW K GA  + +  GLDYLGNP L
Sbjct:   13 FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA-RNGIKFGEAVWFKAGA-QIFSEGGLDYLGNPSL 153          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 9.298e-53
Identity = 101/143 (70.63%), Postives = 114/143 (79.72%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 153          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 9.298e-53
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAV L+P  +E+   GR++MRKT   +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 151          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.586e-52
Identity = 102/141 (72.34%), Postives = 112/141 (79.43%), Query Frame = 3
Query:  102 GKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            GKAV L P+ +E+   GRI+MRKTA K  +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 153          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.705e-52
Identity = 101/143 (70.63%), Postives = 115/143 (80.42%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPELF  +      +AVW K G+  +    GLDYLGNP L
Sbjct:   13 FAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA-RNGVKFGEAVWFKAGS-QIFKEGGLDYLGNPSL 152          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.991e-51
Identity = 101/139 (72.66%), Postives = 109/139 (78.42%), Query Frame = 3
Query:  102 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            GKAV +APS +EL   GR+SMRKT    VS  SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   15 GKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPSL 150          
BLAST of EY674756 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.664e-51
Identity = 99/142 (69.72%), Postives = 112/142 (78.87%), Query Frame = 3
Query:   96 FVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFGPQTESSSVKAVWIKGGAPNLSTRAGLDYLGNPKL 518
            F GKAVNL+P+ +E+   GR++MRKT +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEL   +      +AVW K G+  + +  GLDYLGNP L
Sbjct:   13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA-RNGVKFGEAVWFKAGS-QIFSDGGLDYLGNPSL 152          
The following BLAST results are available for this feature:
BLAST of EY674756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CB23_SOYBN1.874e-5374.82Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB24_PETSP2.447e-5372.03Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB27_TOBAC3.196e-5371.33Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB23_PETSP7.119e-5370.63Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB25_PETSP9.298e-5370.63Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB21_SINAL9.298e-5370.21Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB2A_SPIOL1.586e-5272.34Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PETSP2.705e-5270.63Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB23_APIGR2.991e-5172.66Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_ARATH6.664e-5169.72Chlorophyll a-b binding protein 165/180, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-A12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674756 ID=EY674756; Name=EY674756; organism=Citrus sinensis; type=EST; length=1005bp
CTTCTCTTGCTTACACAGCTTCTCTTGCTTACCCAGCTTCTGCTTCTCAA
TTAAATTCCTCAATGGCAACCTCAACAATGGCTCTCTCCTCATCATTCGT
CGGCAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCAATGGTG
GCCGCATCTCCATGCGTAAAACCGCGAGCAAGTCTGTTTCTTCAGGTAGC
CCGTGGTACGGCCCAGACAGAGTCAAGTACTTGGGCCCATTCTCTGGCGA
GCCCCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTTGGGACA
CAGCCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTC
GAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTCTT
CCCGGAGCTCTTTGGCCCGCAAACGGAATCAAGTTCAGTGAAAGCCGTGT
GGATCAAGGGGGGAGCCCCAAATCTTTCAACGAGGGCGGGGCTAGACTAC
TTGGGAAACCCCAAGCTTGAATCCCAAGCCCGAAAACATCTTGGCCAATC
TGGGCTTGGCCAAAGGTGGGATCTTTGAAAGGGAACCCGTAAAGGGTTAC
AAAAATAGCTGGGAGGGCCGCTAGGTTGAAAATAAAATGAACCCCATTTG
AAACCAAGGTGGGACACTTTTTAAACCCTTAGGGAGTTTTGGGCATGAGG
AACCCGGAAGGGATTTTGGTAAAAACTCAAAAGGTAAAAGAAAAAAAAAA
AATAGAAAGAGGAGGGGTAAATTATCCCACAGATTTTGGGTTTAATACTC
AATAAGAGGAATTTTGAACACAAGCAAAGGGAAGCCCTATTAAAAAAAAA
AGTGGGAAAACAAAACAATTGGAGAAAAAAAACCAGAAAATAAAAAAAAA
AAGAAAAATCGGGAGGAACACAATCCACCCCACACAAAAAAATTTTTTAA
CCCCCACAGGAAAAAAAAAGAGAAGAGAGAGACGTCCAAGGGGAGGGCGT
AAGAA
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