EY702711

Overview
NameEY702711
Unique NameEY702711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9998 contig Csv1_Contig9998:1..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_STAA8 (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain NCTC 8325) GN=recG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.520e-31
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            +VL M+ATPIPRTLA++++G+M ++ I  LP GR PI T       + Y+ V   M  EL+ G + Y++ P+IE SE L  ++   +  E++ Q +     GL  G++ +DEK
Sbjct:  413 NVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIIT--TWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEK 523          

HSP 2 Score: 77.0258 bits (188), Expect = 1.520e-31
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLL-DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q+A MVPTE+LA QH E L+ L  D+M        +ALLTGS   K+ +++ + L+ G I  +IGTH+LI + V F  + L I DEQ RFGV QR     K
Sbjct:  315 QSALMVPTEILAEQHAESLMALFGDSMN-------VALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVNQRQLLREK 408          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_BACSU (ATP-dependent DNA helicase recG OS=Bacillus subtilis GN=recG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.356e-31
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q A MVPTE+LA QH + L+ L +     K    +ALLT S   K+ + + + L  G+I +++GTH+LI ++VEF AL L I DEQ RFGV QR +  +K
Sbjct:  307 QGALMVPTEILAEQHADSLVSLFE-----KWDVSVALLTSSVKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRNK 401          

HSP 2 Score: 72.7886 bits (177), Expect = 3.356e-31
Identity = 41/115 (35.65%), Postives = 73/115 (63.48%), Query Frame = 2
Query:  446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQ-DYSCGLXPGEMKSDEK 787
            P VL M+ATPIPRTLA+ ++G+M ++ I ++P GR  I+TY ++ +    + +   +  EL+ G + Y++ P+IE+S++L  ++ A      +S  F+  ++ GL  G++ SDEK
Sbjct:  405 PDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDM--LDRILAFVEKELKQGRQAYIICPLIEESDKL-DVQNAIDVYNMLSDIFRGKWNVGLMHGKLHSDEK 516          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_STAAR (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain MRSA252) GN=recG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.256e-30
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  449 HVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            +VL M+ATPIPRTLA++++G+M ++ I  LP GR PI T       + Y+ V   M  EL+ G + Y++ P+IE SE L  ++   +  E++ Q +     GL  G++ +DEK
Sbjct:  413 NVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIIT--TWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEK 523          

HSP 2 Score: 73.9442 bits (180), Expect = 1.256e-30
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLL-DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q+A MVPTE+LA QH E L+ L  D+M        +ALLTGS   K+ +++ + L+   I  +IGTH+LI + V F  + L I DEQ RFGV QR     K
Sbjct:  315 QSALMVPTEILAEQHAESLIALFGDSMN-------VALLTGSVKGKKRKILLEQLENRTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVNQRQLLREK 408          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_BORBU (ATP-dependent DNA helicase recG OS=Borrelia burgdorferi GN=recG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.773e-30
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  452 VLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYII-EGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            +L MSATPIPR+ AL L+GD+ ++ I  LP GR+PI TY+   GNE   + VY+ +  EL  G +VY VYP+I  SE+  +L+   +    + + F +Y   +   ++ SD K
Sbjct:  413 MLLMSATPIPRSFALTLFGDLEVSFIKTLPKGRLPITTYLARHGNE---DKVYEFLRKELLKGHQVYFVYPLISSSEKF-ELKDVNNMCLKLKEVFGEYVVDMLHSKLPSDLK 521          

HSP 2 Score: 75.8702 bits (185), Expect = 2.773e-30
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q AFM PT+LLA QHY++L  +L           + LLTGS   K      + ++ G   L++GTH++  E  EF  L   I+DEQ +FGVVQR    +K
Sbjct:  313 QVAFMAPTDLLARQHYDNLSNILAPFNIS-----MTLLTGSLRKKDKEQALESIRNGTSGLIVGTHAIFYESTEFKRLAYVIIDEQHKFGVVQREELKNK 407          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_TREPA (ATP-dependent DNA helicase recG OS=Treponema pallidum GN=recG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.054e-29
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  416 GSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEKMR 793
            G   + Q   PH++ MSATPIPRTLAL+++GD+ ++ I  +P GR P+ TYI    +   E VY+ + +E++ G + Y +YP I     L  L++       +   F  Y+  +   +M  +E+ R
Sbjct:  416 GREGNPQGKTPHIIMMSATPIPRTLALSVFGDLDISIIKSMPGGRKPVITYIARKTKA--EKVYEFVGNEIEKGRQAYFIYPRIHDI-GLTDLKSVQCMYMYLKNYFARYAVAMIHSKMTEEEQQR 538          

HSP 2 Score: 71.633 bits (174), Expect = 5.054e-29
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q A + PTELLA QH +   +LL  +       ++A LTG+   +    + + L  G+I LV+GTH+L ++ V +  LRL I+DEQ RFGV+QR     K
Sbjct:  321 QVALLAPTELLARQHADTAARLLAPIGI-----RLAFLTGNVKSEGRAYLLEALVAGEINLVVGTHALFSKSVRYHDLRLVIIDEQHRFGVLQRSALIQK 415          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_MYCTU (ATP-dependent DNA helicase recG OS=Mycobacterium tuberculosis GN=recG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.451e-28
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q A + PTE+LA QH   +  +L  +         ++  ++ALLTGS    Q + +R ++ +G + +VIGTH+L+ E V+F  L + +VDEQ RFGV QR +  +K
Sbjct:  338 QCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAK 443          

HSP 2 Score: 68.9366 bits (167), Expect = 1.451e-28
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  440 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYKMMLDELQSGGKVYLVYPVIEQSEQL-------PQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            + PH+L M+ATPIPRT+AL +YGD+  + + +LP GR PI T +I   +K    +  ++ +++E  +G + Y+V P I++S+         P   A        S    +    L  G + +D+K
Sbjct:  448 ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRLALMHGRLSADDK 572          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_MYCBO (ATP-dependent DNA helicase recG OS=Mycobacterium bovis GN=recG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.451e-28
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEED------KHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q A + PTE+LA QH   +  +L  +         ++  ++ALLTGS    Q + +R ++ +G + +VIGTH+L+ E V+F  L + +VDEQ RFGV QR +  +K
Sbjct:  338 QCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAK 443          

HSP 2 Score: 68.9366 bits (167), Expect = 1.451e-28
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  440 MAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYKMMLDELQSGGKVYLVYPVIEQSEQL-------PQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            + PH+L M+ATPIPRT+AL +YGD+  + + +LP GR PI T +I   +K    +  ++ +++E  +G + Y+V P I++S+         P   A        S    +    L  G + +D+K
Sbjct:  448 ITPHLLVMTATPIPRTVALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRLALMHGRLSADDK 572          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_MYCLE (ATP-dependent DNA helicase recG OS=Mycobacterium leprae GN=recG PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.557e-27
Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLD------NMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSK 392
            Q   + PTE+LA QH   +  +L        +   ++  ++ALLTGS  + Q + +R D+ +G   +VIGTH+L+ + +EF  L + +VDEQ RFGV QR +  +K
Sbjct:  338 QCVLLAPTEVLAAQHLLSIRDVLGPLGMGCQLGGAENATQVALLTGSMTMAQKKKVRADIFSGQTGIVIGTHALLQDAIEFHNLGMVVVDEQHRFGVEQRDQLRTK 443          

HSP 2 Score: 69.3218 bits (168), Expect = 1.557e-27
Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEK--GYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETI--------SQRFQDYSCGLXPGEMKSDEK----MRF*NGQI 811
            PH+L M+ATPIPRT+AL +YGD+ ++ + +LP GR PI + +I   +K    +  ++ +L+E+ +G + Y+V P I+++E   +    +   ET         S    +    L  G + +DEK    M F  G+I
Sbjct:  450 PHLLVMTATPIPRTVALTVYGDLEMSTLRELPRGRQPITSNVIFVKDKPGWLDRAWQRILEEVAAGRQAYVVAPRIDETEDPQKGGQNSRPSETADGLYARLRSGELANVRLALMHGRLSADEKDAAMMAFRAGEI 585          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_HAEIN (ATP-dependent DNA helicase recG OS=Haemophilus influenzae GN=recG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.585e-27
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK----MRF*NGQI 811
            PH L M+ATPIPRTLA+ +Y D+  + I +LPPGR PI T ++   E+  E V ++    +    + Y V  +I++SE L + +AA +  E +++     + GL  G MK  EK    MRF N ++
Sbjct:  421 PHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTVVV-SEERRAEIVMRVKNACVNEKRQAYWVCTLIDESEVL-EAQAAEAIWEDLTKALPMLNIGLVHGRMKPQEKQDVMMRFKNAEL 544          

HSP 2 Score: 67.3958 bits (163), Expect = 7.585e-27
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKP---KIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374
            Q A M PTE+LA QH  +  +          KP   ++  L G    K  +   + ++TG + +V+GTH+L  E+VEFS L L I+DEQ RFGV QR
Sbjct:  319 QVALMAPTEILAEQHANNFRRWF--------KPFGIEVGWLAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQEEVEFSDLALVIIDEQHRFGVHQR 407          
BLAST of EY702711 vs. ExPASy Swiss-Prot
Match: RECG_PASMU (ATP-dependent DNA helicase recG OS=Pasteurella multocida GN=recG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.037e-25
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 3
Query:   93 QAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQR 374
            Q A M PTE+LA QH  +  +  +++  +     +  L G    K  +   + ++TG + +V+GTH+L  ++VEFS L L IVDEQ RFGV QR
Sbjct:  319 QVALMAPTEILAEQHATNFRRWFESLGIE-----VGWLAGKVKGKARQTELEKIRTGQVQMVVGTHALFQDEVEFSDLALVIVDEQHRFGVHQR 407          

HSP 2 Score: 67.781 bits (164), Expect = 3.037e-25
Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  446 PHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPVIEQSEQLPQLRAAASDLETISQRFQDYSCGLXPGEMKSDEK 787
            PH L M+ATPIPRTLA+ +Y D+  + I +LPPGR PI T  I   E+  E + ++    +    + Y V  +I++SE L + +AA +  E + +       GL  G MK  EK
Sbjct:  421 PHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTVAI-SEERRAEVIARVNHACVNEKRQAYWVCTLIDESEVL-EAQAAEAIAEDLRKILPHLRIGLVHGRMKPAEK 532          
The following BLAST results are available for this feature:
BLAST of EY702711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
RECG_STAA81.520e-3138.05ATP-dependent DNA helicase recG OS=Staphylococcus ... [more]
RECG_BACSU3.356e-3145.00ATP-dependent DNA helicase recG OS=Bacillus subtil... [more]
RECG_STAAR1.256e-3038.05ATP-dependent DNA helicase recG OS=Staphylococcus ... [more]
RECG_BORBU2.773e-3039.82ATP-dependent DNA helicase recG OS=Borrelia burgdo... [more]
RECG_TREPA5.054e-2933.33ATP-dependent DNA helicase recG OS=Treponema palli... [more]
RECG_MYCTU1.451e-2837.74ATP-dependent DNA helicase recG OS=Mycobacterium t... [more]
RECG_MYCBO1.451e-2837.74ATP-dependent DNA helicase recG OS=Mycobacterium b... [more]
RECG_MYCLE1.557e-2736.79ATP-dependent DNA helicase recG OS=Mycobacterium l... [more]
RECG_HAEIN7.585e-2737.30ATP-dependent DNA helicase recG OS=Haemophilus inf... [more]
RECG_PASMU3.037e-2539.36ATP-dependent DNA helicase recG OS=Pasteurella mul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-D06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702711 ID=EY702711; Name=EY702711; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGGTAAAAGTTACTTTGTTCGAGGTCTTCTCATTTGGATAG
TTTAGTTCATAATGATGGTCGTCAGATTCAGTGTCTTTTCTTCAGGCAGC
TTTTATGGTTCCAACTGAGTTGCTTGCAACCCAGCACTATGAGCACTTGC
TTAAATTGCTAGATAATATGGAGGAGGACAAGCACAAACCTAAAATTGCC
TTACTAACAGGTTCAACACCAGTAAAACAATCCCGGATGATCCGTAAGGA
TCTTCAAACTGGAGATATCACTCTGGTCATTGGAACCCATAGTTTAATTG
CTGAAAAAGTTGAATTTTCTGCTTTACGCCTCGCTATTGTGGATGAACAA
CAACGCTTTGGTGTGGTACAGAGAGGCAGATTTAACAGTAAGGTATGGCA
ATGGTTAATTCAGACGGGTCTCCAAAAGATGATCAACATATGGCTCCTCA
TGTTCTTGCCATGTCAGCCACTCCTATCCCAAGAACGCTTGCTTTGGCAT
TATATGGGGATATGTCCTTAACACAGATAACTGACTTACCTCCAGGAAGG
ATACCTATTAAGACCTACATCATTGAAGGAAATGAGAAGGGCTATGAGAA
TGTGTACAAGATGATGCTTGACGAACTGCAATCAGGTGGAAAAGTGTACC
TTGTGTATCCTGTCATTGAACAATCTGAGCAGTTGCCCCAGCTCCGTGCT
GCTGCTTCAGATCTTGAAACTATATCTCAAAGATTTCAGGATTACAGCTG
CGGGTTGNTGCCTGGGGAAATGAAGAGTGACGAAAAGATGAGGTTTTAGA
ACGGTCAGATCTGGCGAGACACTATATTGCTTTCCACTAAGTAATTGAAA
TGGTGGTGATGGTCCCAAG
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