EY702112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 233.802 bits (595), Expect = 9.700e-61 Identity = 139/248 (56.05%), Postives = 162/248 (65.32%), Query Frame = 3 Query: 132 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLV H++KNFM LPNIK PLILGIWG GKSF ELVFAKMGITP MMS ++ E + A +L KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLI--KKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 252
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 3.686e-60 Identity = 137/244 (56.15%), Postives = 161/244 (65.98%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 GA S P++ F G LKK + S++ FK+ A E+DE KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLV HI+KNFM LPNIK PLILGIWG GKSF ELVFAKMGI P MMS ++ E + A ++ KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII--KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 247
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.549e-58 Identity = 132/243 (54.32%), Postives = 156/243 (64.20%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+ H+ KNFM LPNIK PLILGIWG GKSF ELVFAKMGI P MMS G++ P + KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA---GELESGNGEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 243
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56 Identity = 130/243 (53.50%), Postives = 156/243 (64.20%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLV H++KNFM LPNIK PLILGIWG GKSF ELVFAKMGI P MMS ++ E + A ++ KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI--KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 246
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.357e-54 Identity = 126/252 (50.00%), Postives = 155/252 (61.51%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 A PL+ NGS A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLV HITKNF+ LPNIK PLILG+WG GKSF ELVFAK+GI P MMS ++ E + A +L KG+M I+DLE G GR+ G + V V A TL+N Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI--AKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNA---TLMN 254
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.906e-32 Identity = 85/201 (42.29%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 192 SRIPPSKVPSASFKITAEVDENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRL 785 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ HI KNFM LP IK PLILGIWG GK+F L + K+GI P +MS ++ E + + A ++ KGRM I+DL+AG GR+ Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDII--KKGRMCSLFINDLDAGAGRM 210
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.016e-17 Identity = 70/170 (41.18%), Postives = 75/170 (44.12%), Query Frame = 3 Query: 285 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKG---RMGCPPIDDLEAGPGRL 785 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR PLILGIWG KMGI P MMS AG L G +M C I+DL+AG GR+ Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLRV------------------------------------PLILGIWG--------------GKMGINPIMMS----------------------AGELESGNAGEPAKMCCLFINDLDAGAGRV 96
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15 Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 462 YIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGR 782 YIAP F+DKL HITKNF+ LP ++ PLILGI G GK+F EL F KMG+ T++SG ++ + P P +I +G+M I+DL+AG GR Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGEL-ESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGR 109
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15 Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 462 YIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGR 782 YIAP F+DKL HITKNF+ +P ++ PLILGI G GK+F EL F KMGI T++SG ++ + P P +I +G+M I+DL+AG GR Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGEL-ESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGR 109 The following BLAST results are available for this feature:
BLAST of EY702112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702112 ID=EY702112; Name=EY702112; organism=Citrus sinensis; type=EST; length=871bpback to top |