DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.571e-18 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVAD-----DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 S +A R+ +E K +KD P A P + ++ + + I G +P+ GG+F + + F DYP PPK F +FHPN+ +G++CL IL+E W PA+TI ++LL I LL +PN DP E ++ D Sbjct: 2 SGIALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQD 140
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 232 LRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 +R Q +IN + K+L D S V +++F W+ I GP +S + F + I DYP+ PKV F T + H N+N G ICL+ILK+ W+ +L I ++ SI LL PNP+DP E+A +Y+ D Sbjct: 6 IRRIQNEYNKINND-KNLYAD---SFQINMVDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRND 137
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 1 Query: 235 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 + + A RI K++ +L P +C+ P +D+ +++ I+ P + + G F+ + +YP +PPKV T+V+HPNI+ +G++CL+IL+E W+P L I+ ++ + L +PNP+DPL E A + +T+ Sbjct: 22 KKASAAQLRIQKDINELNL--PNTCATDFPDPNDLLNFKL-IISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTN 153
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 217 FSDGLLRNSQMASKRINKELKDLQKD-----PPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 624 FS ++S+ SKR N QKD P C+ +D+ ++ +I P+D + F +I+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + Sbjct: 60 FSLKTKQSSESGSKRANPAELRAQKDIDEMEVPTGCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQL 200
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.680e-18 Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 226 GLLRNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 G + + A RI K++ +L P +C DD+ +++ I P + + GG F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + + Sbjct: 22 GSSKKASAAQLRIQKDINELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2Z_DANRE (Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18 Identity = 53/126 (42.06%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV-----AFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNP 591 SQ RI +++ + K+PP P DM A I GP D+P+ GG FL PPDYP PP+V T F+PN NG +CL IL WSPA +IS VL+SI SL+T+ NP Sbjct: 69 SQQCILRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTE-NP 193
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18 Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 226 GLLRNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 G + + A RI K++ +L P +C DD+ +++ I P + + GG F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + + Sbjct: 22 GSSKKASAAQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 247 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTD 636 MAS +E+ D+ K + V DD+ + T GP+DS + GGV+ + + P YP+K P V F K++HPN++ S+G++CLD++ + WSP + V S + LL PNP DP E A + D Sbjct: 1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRD 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 226 GLLRNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 G + + A RI K++ +L P +C DD+ +++ I P + + G F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + + Sbjct: 22 GSSKKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 226 GLLRNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 636 G + + A RI K++ +L P +C DD+ +++ I P + + G F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + + Sbjct: 22 GSSKKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |