DR406094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBE2Z_HUMAN (Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 235 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF-----RTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNP 591 R + RI +++ + K+PP P DM A I GP D+P+ GG FL PPDYP PP+V T F+PN NG +CL IL WSPA +IS VL+SI SL+T+ NP Sbjct: 95 RTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTE-NP 221
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.600e-17 Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 579 S++A+ R+ KEL + Q +PP V D++ W ++G + +A + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+ Sbjct: 13 SKIATNRLQKELVEWQMNPPTGFKH-KVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.600e-17 Identity = 43/120 (35.83%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 259 RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 618 R++K++ +L S +D+ +++ TI P + + G F+ S YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL E A Sbjct: 35 RLHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAA 153
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 8.620e-17 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 247 MASKRINKELKDLQKD-PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 624 MASKR+ KEL+ L K+ PP ++ W ++ P P+ F V I FP +YPFKPP + F TK++HPN+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + Sbjct: 2 MASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADL 128
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.126e-16 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 247 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTD 636 M+S +E+ DL K + + D M + GP DS + GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D Sbjct: 1 MSSPSKRREM-DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRD 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.126e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 247 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTD 636 M+S +E+ D+ K + + D M + GP DS + GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D Sbjct: 1 MSSPSKRREM-DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRD 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.920e-16 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 322 VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTD 636 + D M + +GP D+P+ GV+ + + P +YP+K P + F K+FHPNI+ ++GSICLD++ WSP + ++ I LL +PN DPL E A + D Sbjct: 25 INDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRD 131
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.508e-16 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 579 S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 13 SKIACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.508e-16 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 241 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 579 S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 13 SKIACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of DR406094 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.276e-16 Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 250 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL------------DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 618 +S R + E+ + P G V D ++F WQ TI+GP ++ + GG F + FP +YP PP V F ++++HPN+ +G +C+ ++ E+W+P T+ ++LSI S+L+ PN + P E A Sbjct: 10 SSSRSSSEIS--RTTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAA 143 The following BLAST results are available for this feature:
BLAST of DR406094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406094 ID=DR406094; Name=DR406094; organism=Citrus sinensis; type=EST; length=637bpback to top |